RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 CSF1P09603 554 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 GIMD1P0DJR0 217 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 TEX30Q5JUR7 227 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 TMEM205Q6UW68 189 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 ALKAL2Q6UX46 152 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 NUP54Q7Z3B4 507 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 OR2AK2Q8NG84 335 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 STK35Q8TDR2 534 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 RNF128Q8TEB7 428 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 SLC38A3Q99624 504 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 GAL3ST1Q99999 423 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 PELOQ9BRX2 385 aaKnown RBP13.37□□□□□ -0.27
ATG4B-220ENST00000482507 COL25A1Q9BXS0 654 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-220ENST00000482507 ARRDC1-AS1Q9H2J1 176 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 GAREM1Q9H706 876 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 DHCR7Q9UBM7 475 aaKnown RBP13.37□□□□□ -0.27
ATG4B-220ENST00000482507 KIF25Q9UIL4 384 aa13.37□□□□□ -0.27
ATG4B-220ENST00000482507 TRAV36DV7A0A075B6V5 113 aa13.36□□□□□ -0.27
ATG4B-220ENST00000482507 hCG_1807616A0A1W2PRN6 198 aa13.36□□□□□ -0.27
ATG4B-220ENST00000482507 MPZL1O95297 269 aa13.36□□□□□ -0.27
ATG4B-220ENST00000482507 NMBP08949 121 aa13.36□□□□□ -0.27
ATG4B-220ENST00000482507 SPARCP09486 303 aa13.36□□□□□ -0.27
ATG4B-220ENST00000482507 ARRB1P49407 418 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-220ENST00000482507 MELKQ14680 651 aa13.36□□□□□ -0.27
ATG4B-220ENST00000482507 RAB11BQ15907 218 aa13.36□□□□□ -0.27
ATG4B-220ENST00000482507 ZNF679Q8IYX0 411 aa13.36□□□□□ -0.27
ATG4B-220ENST00000482507 OR1J4Q8NGS1 313 aa13.36□□□□□ -0.27
ATG4B-220ENST00000482507 METTL21AQ8WXB1 218 aa13.36□□□□□ -0.27
ATG4B-220ENST00000482507 C12orf10Q9HB07 376 aa13.36□□□□□ -0.27
ATG4B-220ENST00000482507 LOC100289279A0A1B0GTE1 492 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 H3BMH7 237 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 XKRYO14609 159 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 NUDT14O95848 222 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 FAUP35544 74 aaKnown RBP13.35□□□□□ -0.27
ATG4B-220ENST00000482507 NR0B1P51843 470 aaKnown RBP13.35□□□□□ -0.27
ATG4B-220ENST00000482507 EBPQ15125 230 aaKnown RBP13.35□□□□□ -0.27
ATG4B-220ENST00000482507 ARHGAP40Q5TG30 622 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 TMEM225Q6GV28 225 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 TMUB2Q71RG4 321 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 NDUFAF7Q7L592 441 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 LINC00052Q96N35 136 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 ARID1BQ8NFD5 2236 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-220ENST00000482507 ASXL3Q9C0F0 2248 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 FXYD6-FXYD2A0A087WZ82 144 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 MFSD2BA6NFX1 497 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 TEX46H3BTG2 121 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 TSPAN2O60636 221 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 AKAIN1P0CW23 69 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 S100A11P31949 105 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 PRSS3P35030 304 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 RPL27P61353 136 aaKnown RBP13.35□□□□□ -0.27
ATG4B-220ENST00000482507 ZNF528Q3MIS6 628 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 RGS7BPQ6MZT1 257 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-220ENST00000482507 WDFY1Q8IWB7 410 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 OR51A2Q8NGJ7 313 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 GPX8Q8TED1 209 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 ASB5Q8WWX0 329 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 OR11A1Q9GZK7 315 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 FXYD6Q9H0Q3 95 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 ATG5Q9H1Y0 275 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 APMAPQ9HDC9 416 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 PDE7BQ9NP56 450 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 CUTCQ9NTM9 273 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 SDHAF2Q9NX18 166 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 TAS2R4Q9NYW5 299 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 EPHA6Q9UF33 1036 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 CGGBP1Q9UFW8 167 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-220ENST00000482507 SUSD2Q9UGT4 822 aa13.35□□□□□ -0.27
ATG4B-220ENST00000482507 UBE2QL1A1L167 161 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 TUBAL3A6NHL2 446 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 TMEM150CB9EJG8 249 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 PHYHO14832 338 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 NPIPB7O75200 414 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 SLC6A8P48029 635 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 MAP2K6P52564 334 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 SGCBQ16585 318 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 PRSS58Q8IYP2 241 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 GALNT11Q8NCW6 608 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 OIT3Q8WWZ8 545 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 SEH1LQ96EE3 360 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 NPAS1Q99742 590 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 TAS2R8Q9NYW2 309 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 MYEF2Q9P2K5 600 aaKnown RBP13.34□□□□□ -0.27
ATG4B-220ENST00000482507 MRPS18BQ9Y676 258 aaKnown RBP13.34□□□□□ -0.27
ATG4B-220ENST00000482507 SEC16AO15027 2179 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 CPAMD8Q8IZJ3 1885 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 HSPB2A8KAH6 182 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 F5H5P2 479 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 CDC40O60508 579 aaKnown RBP eCLIP13.34□□□□□ -0.274e-6■■□□□ 12.3
ATG4B-220ENST00000482507 HLA-DOBP13765 273 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 IL11P20809 199 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 IL12BP29460 328 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 FOXL2P58012 376 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 ROM1Q03395 351 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 HSPB2Q16082 182 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 VWA2Q5GFL6 755 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 PXDC1Q5TGL8 231 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 SLC18B1Q6NT16 456 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 STEAP1BQ6NZ63 245 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 MAMDC2Q7Z304 686 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms