RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 YRDCQ86U90 279 aaKnown RBP10.27□□□□□ -0.76
SMPD4-218ENST00000482171 MED18Q9BUE0 208 aa10.27□□□□□ -0.76
SMPD4-218ENST00000482171 NKX6-2Q9C056 277 aaPredicted RBP10.27□□□□□ -0.76
SMPD4-218ENST00000482171 NIT2Q9NQR4 276 aa10.27□□□□□ -0.76
SMPD4-218ENST00000482171 PRDM6Q9NQX0 595 aa10.27□□□□□ -0.76
SMPD4-218ENST00000482171 CHRNA9Q9UGM1 479 aa10.27□□□□□ -0.76
SMPD4-218ENST00000482171 SHPKQ9UHJ6 478 aa10.27□□□□□ -0.76
SMPD4-218ENST00000482171 FBXL4Q9UKA2 621 aa10.27□□□□□ -0.76
SMPD4-218ENST00000482171 CDC42EP2O14613 210 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 RAB6AP20340 208 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 OR13C9Q8NGT0 318 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 ARHGDIGQ99819 225 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 MIXL1Q9H2W2 232 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 ZNF346Q9UL40 294 aaKnown RBP10.27□□□□□ -0.77
SMPD4-218ENST00000482171 SPTAN1Q13813 2472 aaKnown RBP10.27□□□□□ -0.77
SMPD4-218ENST00000482171 A0A0D9SG52 128 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 CENPVL1A0A0U1RR11 272 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 KNG1P01042 644 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 SPI1P17947 270 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 VAMP2P63027 116 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 RNF4P78317 190 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 SLC22A6Q4U2R8 563 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 H3F3CQ6NXT2 135 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 HOXB13Q92826 284 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-218ENST00000482171 NXT1Q9UKK6 140 aaKnown RBP10.27□□□□□ -0.77
SMPD4-218ENST00000482171 GJE1A6NN92 205 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 GLCEO94923 617 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 LTBRP36941 435 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 PRTGQ2VWP7 1150 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 SPIN3Q5JUX0 258 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 ZNF704Q6ZNC4 412 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-218ENST00000482171 OR51D1Q8NGF3 324 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 OR5D18Q8NGL1 313 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 OR8D4Q8NGM9 314 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 FOXRED1Q96CU9 486 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-218ENST00000482171 MICU1Q9BPX6 476 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 SMIM3Q9BZL3 60 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 WWTR1Q9GZV5 400 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 EVA1AQ9H8M9 152 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 ISYNA1Q9NPH2 558 aa10.27□□□□□ -0.77
SMPD4-218ENST00000482171 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 BORCS7-ASMTA0A0B4J1R7 106 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 CCSO14618 274 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 GPRIN2O60269 458 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 EIF4E2O60573 245 aaKnown RBP10.26□□□□□ -0.77
SMPD4-218ENST00000482171 TPPPO94811 219 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 CTSBP07858 339 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 GIPP09681 153 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-218ENST00000482171 CXCL3P19876 107 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 S100GP29377 79 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 FASLGP48023 281 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 CAMLGP49069 296 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 PPT1P50897 306 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 UBE2IP63279 158 aaKnown RBP10.26□□□□□ -0.77
SMPD4-218ENST00000482171 CSNK2A1P68400 391 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-218ENST00000482171 THSD4Q6ZMP0 1018 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 FAM57BQ71RH2 274 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 OR51S1Q8NGJ8 323 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 ELP5Q8TE02 316 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 GIMAP5Q96F15 307 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 URM1Q9BTM9 101 aaKnown RBP10.26□□□□□ -0.77
SMPD4-218ENST00000482171 MRI1Q9BV20 369 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 WDR76Q9H967 626 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 LHX9Q9NQ69 397 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 KLK11Q9UBX7 282 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 C4orf51C9J302 202 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 M0QYG6 137 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 ERCC1P07992 297 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-218ENST00000482171 AMY2BP19961 511 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 TUBG1P23258 451 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 SLC26A5P58743 744 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 FLI1Q01543 452 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-218ENST00000482171 C12orf73Q69YU5 71 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 LRRC69Q6ZNQ3 347 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 FBXW5Q969U6 566 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 SLC25A19Q9HC21 320 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 CYSLTR2Q9NS75 346 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 A0A0A6YYH2 397 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 A6NJ64 397 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 YKT6O15498 198 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 CRTAPO75718 401 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-218ENST00000482171 SRMP19623 302 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 ABCD3P28288 659 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 GPR3P46089 330 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 MVDP53602 400 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 S100A12P80511 92 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 ST3GAL2Q16842 350 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 AVPI1Q5T686 147 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 PXKQ7Z7A4 578 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 OR52B4Q8NGK2 314 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 KTI12Q96EK9 354 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-218ENST00000482171 TRAF4Q9BUZ4 470 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-218ENST00000482171 CHRDQ9H2X0 955 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 APMAPQ9HDC9 416 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 HRASLSQ9HDD0 168 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 PCOLCE2Q9UKZ9 415 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 SLC7A11Q9UPY5 501 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 R4GN57 208 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 ICE1Q9Y2F5 2266 aa10.26□□□□□ -0.77
SMPD4-218ENST00000482171 THSD7BQ9C0I4 1608 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms