RNA–Protein interactions for RNA: ENST00000481478.1

CACNA1D-206, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 1 (best)

Gene CACNA1D, Length 5,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-206ENST00000481478 USP51Q70EK9 711 aa11.9□□□□□ -0.5
CACNA1D-206ENST00000481478 LSRQ86X29 649 aaPredicted RBP11.9□□□□□ -0.5
CACNA1D-206ENST00000481478 FAM71CQ8NEG0 241 aa11.9□□□□□ -0.5
CACNA1D-206ENST00000481478 OR5B3Q8NH48 314 aa11.9□□□□□ -0.5
CACNA1D-206ENST00000481478 NMNAT3Q96T66 252 aa11.9□□□□□ -0.5
CACNA1D-206ENST00000481478 EMC7Q9NPA0 242 aa11.9□□□□□ -0.5
CACNA1D-206ENST00000481478 MARCH5Q9NX47 278 aa11.9□□□□□ -0.5
CACNA1D-206ENST00000481478 H7C1C5 153 aa11.9□□□□□ -0.5
CACNA1D-206ENST00000481478 ST8SIA3O43173 380 aa11.9□□□□□ -0.5
CACNA1D-206ENST00000481478 ARNTP27540 789 aa11.9□□□□□ -0.5
CACNA1D-206ENST00000481478 AVPI1Q5T686 147 aa11.9□□□□□ -0.5
CACNA1D-206ENST00000481478 PIGTQ969N2 578 aa11.9□□□□□ -0.5
CACNA1D-206ENST00000481478 LIN7CQ9NUP9 197 aaKnown RBP11.9□□□□□ -0.5
CACNA1D-206ENST00000481478 KCNG2Q9UJ96 466 aa11.9□□□□□ -0.5
CACNA1D-206ENST00000481478 NKX2-1P43699 371 aaPredicted RBP11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 UBE2IP63279 158 aaKnown RBP11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 SELENBP1Q13228 472 aa11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 PCK2Q16822 640 aa11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 ZNF628Q5EBL2 1059 aa11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 BEX5Q5H9J7 111 aa11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 FAM111BQ6SJ93 734 aa11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 ZNF836Q6ZNA1 936 aa11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 THNSL2Q86YJ6 484 aa11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 FAM185AQ8N0U4 392 aa11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 TMEM104Q8NE00 496 aa11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 OR5D18Q8NGL1 313 aa11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 CHST11Q9NPF2 352 aa11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 RBFOX1Q9NWB1 397 aaKnown RBP11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 B3GALT5Q9Y2C3 310 aa11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 KPTNQ9Y664 436 aa11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 SLCO1B1Q9Y6L6 691 aa11.9□□□□□ -0.51
CACNA1D-206ENST00000481478 MFSD12Q6NUT3 480 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 OR13C8Q8NGS7 320 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 OR10K1Q8NGX5 313 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 OR2T11Q8NH01 316 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 OR8U1Q8NH10 309 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 RHOXF1Q8NHV9 184 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 ZFP90Q8TF47 636 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 TMEM38AQ9H6F2 299 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 TMEM30AQ9NV96 361 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 QPCTLQ9NXS2 382 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 LGI1O95970 557 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 SMIM17P0DL12 118 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 C21orf33P30042 268 aaPredicted RBP11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 SRP9P49458 86 aaKnown RBP11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 GNB1P62873 340 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 PMPCAQ10713 525 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 ZNF718Q3SXZ3 478 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 FCRL6Q6DN72 434 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 DCXRQ7Z4W1 244 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 MENTQ9BUN1 341 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 SLC35D1Q9NTN3 355 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 CXXC1Q9P0U4 656 aaPredicted RBP11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 NPFFR2Q9Y5X5 522 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 A0A0U1RQS6 177 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 PPP1R2P9O14990 202 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 GASTP01350 101 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 SDHBP21912 280 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 TAGLN2P37802 199 aaKnown RBP11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 FAM122BQ7Z309 247 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 PLPP6Q8IY26 295 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 PELI3Q8N2H9 469 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 PXT1Q8NFP0 134 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 TMIGD2Q96BF3 282 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 TAAR6Q96RI8 345 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 COMMD5Q9GZQ3 224 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 MN1Q10571 1320 aaPredicted RBP11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 THBS1P07996 1170 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 CALCBP10092 127 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 IGFBP6P24592 240 aaPredicted RBP11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 ACOT6Q3I5F7 207 aaPredicted RBP11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 LINC00346Q8IVM7 164 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 KCNRGQ8N5I3 272 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 EXD3Q8N9H8 876 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 GPR78Q96P69 363 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 RNF32Q9H0A6 362 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 GALNT9Q9HCQ5 603 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 DHCR7Q9UBM7 475 aaKnown RBP11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 ZNF346Q9UL40 294 aaKnown RBP11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 G3V3Y1 287 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 RAF1P04049 648 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 NID1P14543 1247 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 NKAIN1Q4KMZ8 207 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 PXDC1Q5TGL8 231 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 ZNF468Q5VIY5 522 aaPredicted RBP11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 AFMIDQ63HM1 303 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 ZNF705AQ6ZN79 300 aaPredicted RBP11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 GDF7Q7Z4P5 450 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 CAMKMTQ7Z624 323 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 TMEM217Q8N7C4 229 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 ELSPBP1Q96BH3 223 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 MED9Q9NWA0 146 aa11.89□□□□□ -0.51
CACNA1D-206ENST00000481478 TRDV1A0A1B0GX56 115 aa11.88□□□□□ -0.51
CACNA1D-206ENST00000481478 ATP1B1P05026 303 aa11.88□□□□□ -0.51
CACNA1D-206ENST00000481478 MORN4Q8NDC4 146 aa11.88□□□□□ -0.51
CACNA1D-206ENST00000481478 BPIFCQ8NFQ6 507 aa11.88□□□□□ -0.51
CACNA1D-206ENST00000481478 DUSP22Q9NRW4 184 aa11.88□□□□□ -0.51
CACNA1D-206ENST00000481478 TAS2R5Q9NYW4 299 aa11.88□□□□□ -0.51
CACNA1D-206ENST00000481478 HCSTQ9UBK5 93 aa11.88□□□□□ -0.51
CACNA1D-206ENST00000481478 FBXL2Q9UKC9 423 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms