RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 OR56B2PQ8NGI1 322 aa3.05□□□□□ -1.92
CCDC58-204ENST00000479414 RBMXL1Q96E39 390 aaKnown RBP3.05□□□□□ -1.92
CCDC58-204ENST00000479414 ZNF681Q96N22 645 aa3.05□□□□□ -1.92
CCDC58-204ENST00000479414 COL21A1Q96P44 957 aa3.05□□□□□ -1.92
CCDC58-204ENST00000479414 CCDC77Q9BR77 488 aa3.05□□□□□ -1.92
CCDC58-204ENST00000479414 SLC25A2Q9BXI2 301 aa3.05□□□□□ -1.92
CCDC58-204ENST00000479414 ISYNA1Q9NPH2 558 aa3.05□□□□□ -1.92
CCDC58-204ENST00000479414 NMRK1Q9NWW6 199 aa3.05□□□□□ -1.92
CCDC58-204ENST00000479414 GOLT1BQ9Y3E0 138 aa3.05□□□□□ -1.92
CCDC58-204ENST00000479414 TNS2Q63HR2 1409 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 IGHV5-10-1A0A0J9YXX1 117 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 A0A1W2PP18 115 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 TRIM64CA6NLI5 447 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 ERLIN1O75477 346 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 RAB3DO95716 219 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 MRPL3P09001 348 aaKnown RBP3.04□□□□□ -1.92
CCDC58-204ENST00000479414 RHOXF2BP0C7M4 288 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 KRTAP10-10P60014 251 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 SHHQ15465 462 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 C5orf47Q569G3 176 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 ARL9Q6T311 187 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 PP632Q6XCG6 107 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 NOXO1Q8NFA2 376 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 PANX1Q96RD7 426 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 MYCBPQ99417 103 aaPredicted RBP3.04□□□□□ -1.92
CCDC58-204ENST00000479414 NDFIP1Q9BT67 221 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 SAV1Q9H4B6 383 aaPredicted RBP3.04□□□□□ -1.92
CCDC58-204ENST00000479414 ZDHHC4Q9NPG8 344 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 UVRAGQ9P2Y5 699 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 IKBKGQ9Y6K9 419 aa3.04□□□□□ -1.92
CCDC58-204ENST00000479414 KIF26AQ9ULI4 1882 aaPredicted RBP3.04□□□□□ -1.92
CCDC58-204ENST00000479414 A0A1W2PQ67 120 aa3.03□□□□□ -1.92
CCDC58-204ENST00000479414 LRRIQ3A6PVS8 624 aaPredicted RBP3.03□□□□□ -1.92
CCDC58-204ENST00000479414 ZNF705GA8MUZ8 300 aaPredicted RBP3.03□□□□□ -1.92
CCDC58-204ENST00000479414 NUPL2O15504 423 aaKnown RBP3.03□□□□□ -1.92
CCDC58-204ENST00000479414 CHST1O43916 411 aa3.03□□□□□ -1.92
CCDC58-204ENST00000479414 IGHV1-8P0DP01 117 aa3.03□□□□□ -1.92
CCDC58-204ENST00000479414 DCKP27707 260 aa3.03□□□□□ -1.92
CCDC58-204ENST00000479414 KIR3DL2P43630 455 aa3.03□□□□□ -1.92
CCDC58-204ENST00000479414 CRISP1P54107 249 aa3.03□□□□□ -1.92
CCDC58-204ENST00000479414 LRRC74AQ0VAA2 488 aa3.03□□□□□ -1.92
CCDC58-204ENST00000479414 ABCA11PQ4W5N1 156 aa3.03□□□□□ -1.92
CCDC58-204ENST00000479414 FRZBQ92765 325 aa3.03□□□□□ -1.92
CCDC58-204ENST00000479414 RSPO3Q9BXY4 272 aaPredicted RBP3.03□□□□□ -1.92
CCDC58-204ENST00000479414 UBE2ZQ9H832 354 aaPredicted RBP3.03□□□□□ -1.92
CCDC58-204ENST00000479414 SIRT7Q9NRC8 400 aa3.03□□□□□ -1.92
CCDC58-204ENST00000479414 PITPNC1Q9UKF7 332 aa3.03□□□□□ -1.92
CCDC58-204ENST00000479414 VANGL2Q9ULK5 521 aa3.03□□□□□ -1.92
CCDC58-204ENST00000479414 ZNF835Q9Y2P0 537 aa3.03□□□□□ -1.92
CCDC58-204ENST00000479414 USP47Q96K76 1375 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 TMEM150BA6NC51 233 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 K7EMT4 169 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 ZNF207O43670 478 aaKnown RBP3.02□□□□□ -1.93
CCDC58-204ENST00000479414 ADRA2AP08913 450 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 ZNF24P17028 368 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 CEACAM3P40198 252 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 CSNK1EP49674 416 aaKnown RBP3.02□□□□□ -1.93
CCDC58-204ENST00000479414 WDR86Q86TI4 376 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 CMTM1Q8IZ96 169 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 TTC5Q8N0Z6 440 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 ZNF709Q8N972 641 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 OR10AD1Q8NGE0 317 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 ABHD3Q8WU67 409 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 TM4SF18Q96CE8 201 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 TMEM9BQ9NQ34 198 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 ZNF355PQ9NSJ1 428 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 PTTG3PQ9NZH4 202 aa3.02□□□□□ -1.93
CCDC58-204ENST00000479414 TSSC4Q9Y5U2 329 aaPredicted RBP3.02□□□□□ -1.93
CCDC58-204ENST00000479414 A0A1B0GW55 424 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 COLCA2A8K830 154 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 L7N2F9 121 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 AIM2O14862 343 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 LSM1O15116 133 aaKnown RBP3.01□□□□□ -1.93
CCDC58-204ENST00000479414 BET1O15155 118 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 KLHL41O60662 606 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 HLA-DPB1P04440 258 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 CISD3P0C7P0 127 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 DUX4L2P0CJ85 424 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 DUX4L3P0CJ86 424 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 DUX4L5P0CJ88 424 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 DUX4L6P0CJ89 424 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 DUX4L7P0CJ90 424 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 TROVE2P10155 538 aaKnown RBP eCLIP3.01□□□□□ -1.93
CCDC58-204ENST00000479414 ADARB1P78563 741 aaKnown RBP3.01□□□□□ -1.93
CCDC58-204ENST00000479414 LOXL1Q08397 574 aaPredicted RBP3.01□□□□□ -1.93
CCDC58-204ENST00000479414 SNRNP35Q16560 246 aaKnown RBP3.01□□□□□ -1.93
CCDC58-204ENST00000479414 C9orf135Q5VTT2 229 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 RAET1LQ5VY80 246 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 METTL21CQ5VZV1 264 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 REEP3Q6NUK4 255 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 PRMT9Q6P2P2 845 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 CERS6Q6ZMG9 384 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 MBOAT1Q6ZNC8 495 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 IQCKQ8N0W5 287 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 SYNPRQ8TBG9 265 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 CAPSLQ8WWF8 208 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 DEDD2Q8WXF8 326 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 ESR2Q92731 530 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 SPIN2AQ99865 258 aa3.01□□□□□ -1.93
CCDC58-204ENST00000479414 SPIN2BQ9BPZ2 258 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms