RNA–Protein interactions for RNA: ENST00000478954.1

STRADBP1-201, Transcript of STE20-related kinase adaptor beta pseudogene 1, humanhuman

BASIC

Gene STRADBP1, Length 1,281 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBP1-201ENST00000478954 TRDNQ13061 729 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 CRMP1Q14194 572 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 MS4A18Q3C1V0 323 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 HSP90B2PQ58FF3 399 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 C9orf64Q5T6V5 341 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 LGSNQ5TDP6 509 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 XKRXQ6PP77 449 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 LUZP2Q86TE4 346 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 ATP6V0D2Q8N8Y2 350 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 FDCSPQ8NFU4 85 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 FAM76AQ8TAV0 307 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 ANKRD49Q8WVL7 239 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 TRUB1Q8WWH5 349 aaKnown RBP4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 HAVCR1Q96D42 359 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 CELF6Q96J87 481 aaKnown RBP4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 BMFQ96LC9 184 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 LITAFQ99732 161 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 LRRC61Q9BV99 259 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 UBXN6Q9BZV1 441 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 ING2Q9H160 280 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 ZSCAN16Q9H4T2 348 aaPredicted RBP4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 SUDS3Q9H7L9 328 aaPredicted RBP4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 AUNIPQ9H7T9 357 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 NT5MQ9NPB1 228 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 AGPAT4Q9NRZ5 378 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 ABCC13Q9NSE7 274 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 PAK1IP1Q9NWT1 392 aaPredicted RBP4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 SLC39A1Q9NY26 324 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 PDP1Q9P0J1 537 aaPredicted RBP4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 ERVW-1Q9UQF0 538 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 AUP1Q9Y679 476 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 ANKRD12Q6UB98 2062 aa4.45□□□□□ -1.7
STRADBP1-201ENST00000478954 TENM1Q9UKZ4 2725 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 CMYA5Q8N3K9 4069 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 IGLV4-3A0A075B6K6 122 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 IGHV3OR16-12A0A075B7B8 117 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 FRG2CA6NGY1 282 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 ARGFXA6NJG6 315 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 RPL37AP8A6NKH3 93 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 VSTM2BA6NLU5 285 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 USP27XA6NNY8 438 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 PP2D1A8MPX8 630 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 SUPT3HB4E1H0 165 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 F8VP50 259 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 NR5A2O00482 541 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 AP2A1O95782 977 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 ZDHHC11BP0C7U3 371 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 IDSP22304 550 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 TUBG1P23258 451 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 PTBP1P26599 531 aaKnown RBP eCLIP4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 ATP5C1P36542 298 aaKnown RBP4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 ACVR1BP36896 505 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 MAP3K8P41279 467 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 RPS5P46782 204 aaKnown RBP4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 OR1D4P47884 311 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 TAF6P49848 677 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 RIDAP52758 137 aaKnown RBP4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 DEFA6Q01524 100 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 MERTKQ12866 999 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 KLHL38Q2WGJ6 581 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 HNRNPA1L2Q32P51 320 aaKnown RBP4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 PIP5KL1Q5T9C9 394 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 SLC47A2Q86VL8 602 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 KLHDC8BQ8IXV7 354 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 TSEN15Q8WW01 171 aaKnown RBP4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 TOMM40LQ969M1 308 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 ZNF396Q96N95 335 aaPredicted RBP4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 PANX2Q96RD6 677 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 CTRCQ99895 268 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 OCR1Q9BZK8 76 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 NMRAL1Q9HBL8 299 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 TUBG2Q9NRH3 451 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 EHFQ9NZC4 300 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 PTTG3PQ9NZH4 202 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 PSMC3IPQ9P2W1 217 aaPredicted RBP4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 SLC2A6Q9UGQ3 507 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 RNF24Q9Y225 148 aa4.44□□□□□ -1.7
STRADBP1-201ENST00000478954 NUP210LQ5VU65 1888 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 FOXI3A8MTJ6 420 aaPredicted RBP4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 C9JVG2 144 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 E7EWF7 191 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 H3BQV1 296 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 TEX46H3BTG2 121 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 CCL21O00585 134 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 LSM1O15116 133 aaKnown RBP4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 PFKFB2O60825 505 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 P04436 131 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 TNNI1P19237 187 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 KITLGP21583 273 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 ANXA13P27216 316 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 SPAM1P38567 509 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 XCR1P46094 333 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 CDKN1BP46527 198 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 CLDN8P56748 225 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 VLDLRP98155 873 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 PUDPQ08623 228 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 MRPL23Q16540 153 aaKnown RBP4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 TRIM16LQ309B1 348 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 TEX44Q53QW1 395 aa4.43□□□□□ -1.7
STRADBP1-201ENST00000478954 NCCRP1Q6ZVX7 275 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms