RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 KBTBD8Q8NFY9 601 aa23.24■■□□□ 1.31
CCM2-211ENST00000478582 SLC26A10Q8NG04 563 aa23.24■■□□□ 1.31
CCM2-211ENST00000478582 C11orf40Q8WZ69 217 aa23.24■■□□□ 1.31
CCM2-211ENST00000478582 EMC7Q9NPA0 242 aa23.24■■□□□ 1.31
CCM2-211ENST00000478582 TIMM10BQ9Y5J6 103 aa23.24■■□□□ 1.31
CCM2-211ENST00000478582 MPZL1O95297 269 aa23.23■■□□□ 1.31
CCM2-211ENST00000478582 CRYAAP02489 173 aa23.23■■□□□ 1.31
CCM2-211ENST00000478582 ANPEPP15144 967 aa23.23■■□□□ 1.31
CCM2-211ENST00000478582 EPHA2P29317 976 aa23.23■■□□□ 1.31
CCM2-211ENST00000478582 RAB39AQ14964 217 aa23.23■■□□□ 1.31
CCM2-211ENST00000478582 ZNF672Q499Z4 452 aaPredicted RBP23.23■■□□□ 1.31
CCM2-211ENST00000478582 SLX4IPQ5VYV7 408 aa23.23■■□□□ 1.31
CCM2-211ENST00000478582 SLC22A25Q6T423 547 aa23.23■■□□□ 1.31
CCM2-211ENST00000478582 AKAP1Q92667 903 aaKnown RBP eCLIP23.23■■□□□ 1.31
CCM2-211ENST00000478582 PTP4A1Q93096 173 aa23.23■■□□□ 1.31
CCM2-211ENST00000478582 MS4A3Q96HJ5 214 aa23.23■■□□□ 1.31
CCM2-211ENST00000478582 C1orf198Q9H425 327 aa23.23■■□□□ 1.31
CCM2-211ENST00000478582 TEP1Q99973 2627 aaKnown RBP23.22■■□□□ 1.31
CCM2-211ENST00000478582 HS3ST1O14792 307 aa23.22■■□□□ 1.31
CCM2-211ENST00000478582 PTHP01270 115 aa23.22■■□□□ 1.31
CCM2-211ENST00000478582 SPI1P17947 270 aa23.22■■□□□ 1.31
CCM2-211ENST00000478582 CENPAP49450 140 aa23.22■■□□□ 1.31
CCM2-211ENST00000478582 PSG4Q00888 419 aa23.22■■□□□ 1.31
CCM2-211ENST00000478582 PLP2Q04941 152 aa23.22■■□□□ 1.31
CCM2-211ENST00000478582 DBPQ10586 325 aaPredicted RBP23.22■■□□□ 1.31
CCM2-211ENST00000478582 RCN1Q15293 331 aa23.22■■□□□ 1.31
CCM2-211ENST00000478582 ZBTB49Q6ZSB9 765 aa23.22■■□□□ 1.31
CCM2-211ENST00000478582 PROKR2Q8NFJ6 384 aa23.22■■□□□ 1.31
CCM2-211ENST00000478582 OR9Q1Q8NGQ5 310 aa23.22■■□□□ 1.31
CCM2-211ENST00000478582 ZNRF4Q8WWF5 429 aa23.22■■□□□ 1.31
CCM2-211ENST00000478582 KCNS3Q9BQ31 491 aa23.22■■□□□ 1.31
CCM2-211ENST00000478582 MOKQ9UQ07 419 aa23.22■■□□□ 1.31
CCM2-211ENST00000478582 FAM171A2A8MVW0 826 aa23.21■■□□□ 1.31
CCM2-211ENST00000478582 GPANK1O95872 356 aa23.21■■□□□ 1.31
CCM2-211ENST00000478582 TFP02787 698 aa23.21■■□□□ 1.31
CCM2-211ENST00000478582 PAICSP22234 425 aaKnown RBP23.21■■□□□ 1.31
CCM2-211ENST00000478582 CALCRP30988 508 aa23.21■■□□□ 1.31
CCM2-211ENST00000478582 PYCR1P32322 319 aa23.21■■□□□ 1.31
CCM2-211ENST00000478582 RAD23AP54725 363 aa23.21■■□□□ 1.31
CCM2-211ENST00000478582 AQP6Q13520 282 aa23.21■■□□□ 1.31
CCM2-211ENST00000478582 PABPC1L2AQ5JQF8 200 aa23.21■■□□□ 1.31
CCM2-211ENST00000478582 C12orf73Q69YU5 71 aa23.21■■□□□ 1.31
CCM2-211ENST00000478582 EME1Q96AY2 570 aa23.21■■□□□ 1.31
CCM2-211ENST00000478582 SLC29A1Q99808 456 aa23.21■■□□□ 1.31
CCM2-211ENST00000478582 PRRG3Q9BZD7 231 aa23.21■■□□□ 1.31
CCM2-211ENST00000478582 OR2H1Q9GZK4 316 aa23.21■■□□□ 1.31
CCM2-211ENST00000478582 BEX4Q9NWD9 120 aaPredicted RBP23.21■■□□□ 1.31
CCM2-211ENST00000478582 TVP23BQ9NYZ1 205 aa23.21■■□□□ 1.31
CCM2-211ENST00000478582 ORC6Q9Y5N6 252 aa23.21■■□□□ 1.31
CCM2-211ENST00000478582 IGHV2OR16-5A0A0B4J2B6 119 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 IQCMA0A1B0GVH7 501 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 FAM183AA6NL82 134 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 PRR23D1E9PI22 279 aaPredicted RBP23.2■■□□□ 1.3
CCM2-211ENST00000478582 ATP6V1G2-DDX39BF2Z307 99 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 PRR23D2P0DMB1 279 aaPredicted RBP23.2■■□□□ 1.3
CCM2-211ENST00000478582 ZNF35P13682 527 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 POLR2IP36954 125 aaKnown RBP23.2■■□□□ 1.3
CCM2-211ENST00000478582 BLVRAP53004 296 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 EFNB1P98172 346 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 TEKQ02763 1124 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 SCRN3Q0VDG4 424 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 SNAPC1Q16533 368 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 ZNF611Q8N823 705 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 NEUROG1Q92886 237 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 PLEKHA8Q96JA3 519 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 HCAR1Q9BXC0 346 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 WNT5BQ9H1J7 359 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 UBTD1Q9HAC8 227 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 MRPL22Q9NWU5 206 aaKnown RBP23.2■■□□□ 1.3
CCM2-211ENST00000478582 CISD1Q9NZ45 108 aaKnown RBP23.2■■□□□ 1.3
CCM2-211ENST00000478582 KCNG2Q9UJ96 466 aa23.2■■□□□ 1.3
CCM2-211ENST00000478582 CLUP10909 449 aa23.19■■□□□ 1.3
CCM2-211ENST00000478582 CDH11P55287 796 aa23.19■■□□□ 1.3
CCM2-211ENST00000478582 MEP1BQ16820 701 aa23.19■■□□□ 1.3
CCM2-211ENST00000478582 C20orf204Q6ZNR8 217 aa23.19■■□□□ 1.3
CCM2-211ENST00000478582 TGIF2LYQ8IUE0 185 aa23.19■■□□□ 1.3
CCM2-211ENST00000478582 ALDH16A1Q8IZ83 802 aa23.19■■□□□ 1.3
CCM2-211ENST00000478582 CPEB3Q8NE35 698 aaKnown RBP23.19■■□□□ 1.3
CCM2-211ENST00000478582 SLC30A7Q8NEW0 376 aa23.19■■□□□ 1.3
CCM2-211ENST00000478582 OR4F15Q8NGB8 312 aa23.19■■□□□ 1.3
CCM2-211ENST00000478582 FBXW5Q969U6 566 aa23.19■■□□□ 1.3
CCM2-211ENST00000478582 RIBC2Q9H4K1 309 aa23.19■■□□□ 1.3
CCM2-211ENST00000478582 DCLRE1BQ9H816 532 aa23.19■■□□□ 1.3
CCM2-211ENST00000478582 MED20Q9H944 212 aa23.19■■□□□ 1.3
CCM2-211ENST00000478582 HINT3Q9NQE9 182 aaKnown RBP23.19■■□□□ 1.3
CCM2-211ENST00000478582 RAI1Q7Z5J4 1906 aaPredicted RBP23.18■■□□□ 1.3
CCM2-211ENST00000478582 E7EQL1 145 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 E9PQ18 207 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 HLA-DQA2P01906 255 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 GYPBP06028 91 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 FMO3P31513 532 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 HIST1H3AP68431 136 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 HIST2H3PS2Q5TEC6 136 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 LINC01590Q5TEZ4 76 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 PLBD1Q6P4A8 553 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 HIST2H3AQ71DI3 136 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 CPOQ8IVL8 374 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 OR10H5Q8NGA6 315 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 OR51L1Q8NGJ5 315 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 OR1J2Q8NGS2 313 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms