RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 OR51F2Q8NH61 342 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 PNPT1Q8TCS8 783 aaKnown RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF418Q8TF45 676 aaPredicted RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 OIT3Q8WWZ8 545 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 RDH5Q92781 318 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 TAAR8Q969N4 342 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 MUL1Q969V5 352 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 TUBGCP3Q96CW5 907 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 NMD3Q96D46 503 aaKnown RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 FAHD2AQ96GK7 314 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 TXNDC15Q96J42 360 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 MPP4Q96JB8 637 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 C16orf45Q96MC5 204 aaPredicted RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 CCDC115Q96NT0 180 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 ANKRD27Q96NW4 1050 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF317Q96PQ6 595 aaPredicted RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 TRNT1Q96Q11 434 aaKnown RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 FYTTD1Q96QD9 318 aaKnown RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 OR2M2Q96R28 347 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 KCNS3Q9BQ31 491 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 WFDC6Q9BQY6 131 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 SLC35A5Q9BS91 424 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 RBM4Q9BWF3 364 aaKnown RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 MTHFD2LQ9H903 347 aaPredicted RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 CRLF2Q9HC73 371 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 DYNLRB1Q9NP97 96 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 EXD2Q9NVH0 621 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 DCAF16Q9NXF7 216 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 MARCOQ9UEW3 520 aaPredicted RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 CMAHPQ9Y471 501 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 PPIAL4AQ9Y536 164 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 IGKV2D-30A0A075B6S6 120 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF99A8MXY4 864 aaPredicted RBP3.86□□□□□ -1.79
CKS1B-207ENST00000477676 LRRN3E7EW58 273 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 PRR23D1E9PI22 279 aaPredicted RBP3.86□□□□□ -1.79
CKS1B-207ENST00000477676 M0R3G1 203 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 KRT33AO76009 404 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 VAMP5O95183 116 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 MPZL1O95297 269 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 DBIP07108 87 aaKnown RBP3.86□□□□□ -1.79
CKS1B-207ENST00000477676 PRR23D2P0DMB1 279 aaPredicted RBP3.86□□□□□ -1.79
CKS1B-207ENST00000477676 CCL2P13500 99 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 ETFAP13804 333 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 IL7RP16871 459 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 CBLP22681 906 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 HTR2AP28223 471 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 GRPRP30550 384 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 CHI3L1P36222 383 aaPredicted RBP3.86□□□□□ -1.79
CKS1B-207ENST00000477676 ARR3P36575 388 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 RPS5P46782 204 aaKnown RBP3.86□□□□□ -1.79
CKS1B-207ENST00000477676 SH3BGRP55822 239 aaPredicted RBP3.86□□□□□ -1.79
CKS1B-207ENST00000477676 NME5P56597 212 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 TMEM33P57088 247 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 ERVS71-1P61550 626 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 UFM1P61960 85 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 CCL8P80075 99 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 MYBPC1Q00872 1141 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 ZP4Q12836 540 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 MFSD13AQ14CX5 517 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 GSTA3Q16772 222 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 GTDC1Q4AE62 458 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 MIDNQ504T8 468 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 ATAD3BQ5T9A4 648 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 CARD17Q5XLA6 110 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 ATG16L1Q676U5 607 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 WBP2NLQ6ICG8 309 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 SHQ1Q6PI26 577 aaKnown RBP3.86□□□□□ -1.79
CKS1B-207ENST00000477676 WDR88Q6ZMY6 472 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 ABHD12BQ7Z5M8 362 aaPredicted RBP3.86□□□□□ -1.79
CKS1B-207ENST00000477676 C20orf196Q8IYI0 205 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 C10orf111Q8N326 155 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 CADM2Q8N3J6 435 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 SIGLECL1Q8N7X8 197 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF781Q8N8C0 355 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 DEFB108BQ8NET1 73 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 MFSD8Q8NHS3 518 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 TCP10LQ8TDR4 215 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 VPS33AQ96AX1 596 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 TESCQ96BS2 214 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 SLC25A36Q96CQ1 311 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 APOPT1Q96IL0 206 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 OXGR1Q96P68 337 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 SORT1Q99523 831 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 PRPF18Q99633 342 aaKnown RBP3.86□□□□□ -1.79
CKS1B-207ENST00000477676 EMC6Q9BV81 110 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 TMEM120AQ9BXJ8 343 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 DPY30Q9C005 99 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF665Q9H7R5 613 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 MMP26Q9NRE1 261 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 MED29Q9NX70 200 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 RCE1Q9Y256 329 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 RASD1Q9Y272 281 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF443Q9Y2A4 671 aaPredicted RBP3.86□□□□□ -1.79
CKS1B-207ENST00000477676 GRIP1Q9Y3R0 1128 aa3.86□□□□□ -1.79
CKS1B-207ENST00000477676 DNAH1Q9P2D7 4330 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 IGLV3-9A0A075B6K5 115 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 A0A0G2JK05 382 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 LOC102725191A0A1B0GVB3 256 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 FAM90A10PA6NDY2 464 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 C17orf100A8MU93 164 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms