RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 MCHR2Q969V1 340 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 CPNE4Q96A23 557 aaPredicted RBP7.07□□□□□ -1.28
VMA21-203ENST00000477649 TXNDC15Q96J42 360 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 OR14A2Q96R54 314 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 KCNJ15Q99712 375 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 PDCD1LG2Q9BQ51 273 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 PPP1R3EQ9H7J1 279 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 NOX4Q9NPH5 578 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 B3GAT2Q9NPZ5 323 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 MED29Q9NX70 200 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 SLCO1C1Q9NYB5 712 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 GLTPQ9NZD2 209 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 CYB5R1Q9UHQ9 305 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 HHLA2Q9UM44 414 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 FOXJ3Q9UPW0 622 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 KLHDC2Q9Y2U9 406 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 HRH3Q9Y5N1 445 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 ZNF318Q5VUA4 2279 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 A0A0J9YW62 118 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 A0A1B0GVG6 124 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 OR5H15A6NDH6 313 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 IFITM5A6NNB3 132 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 FAM25AB3EWG3 89 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 FAM25CB3EWG5 89 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 FAM25GB3EWG6 89 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 SHISA8B8ZZ34 492 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 ZNF878C9JN71 531 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 CTDSPLO15194 276 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 SULT1B1O43704 296 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 HPGDSO60760 199 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 NEURL1O76050 574 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 UBL3O95164 117 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 ACTL6AO96019 429 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 SLC2A2P11168 524 aaPredicted RBP7.06□□□□□ -1.28
VMA21-203ENST00000477649 POU3F2P20265 443 aaPredicted RBP7.06□□□□□ -1.28
VMA21-203ENST00000477649 CTSSP25774 331 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 GDF1P27539 372 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 THBS2P35442 1172 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 MNDAP41218 407 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 PITPNBP48739 271 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 DNASE1L1P49184 302 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 INPP1P49441 399 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 BCAP31P51572 246 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 CLDN17P56750 224 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 TCF15Q12870 199 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 MFAP5Q13361 173 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 TOMM20Q15388 145 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 OR1C1Q15619 314 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 ZNF79Q15937 498 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 ETFDHQ16134 617 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 NRN1LQ496H8 165 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 PYDC2Q56P42 97 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 WDR38Q5JTN6 314 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 CEP78Q5JTW2 689 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 UBE2NLQ5JXB2 153 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 RIPPLY2Q5TAB7 128 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 SLC25A25Q6KCM7 469 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 LYPD4Q6UWN0 246 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 DCXRQ7Z4W1 244 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 SLC22A16Q86VW1 577 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 ZNF227Q86WZ6 799 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 NKAIN3Q8N8D7 197 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 FAM83FQ8NEG4 500 aaPredicted RBP7.06□□□□□ -1.28
VMA21-203ENST00000477649 DEFB124Q8NES8 71 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 OR2M7Q8NG81 312 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 OR6N1Q8NGY5 312 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 ZNF671Q8TAW3 534 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 TRMT10AQ8TBZ6 339 aaKnown RBP7.06□□□□□ -1.28
VMA21-203ENST00000477649 ST7LQ8TDW4 575 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 DEDD2Q8WXF8 326 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 C11orf40Q8WZ69 217 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 FOXRED1Q96CU9 486 aaPredicted RBP7.06□□□□□ -1.28
VMA21-203ENST00000477649 AGAP4Q96P64 663 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 SDHCQ99643 169 aaPredicted RBP7.06□□□□□ -1.28
VMA21-203ENST00000477649 SLC22A4Q9H015 551 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 TMEM185BQ9H7F4 350 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 RNF122Q9H9V4 155 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 EXTL2Q9UBQ6 330 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 CDV3Q9UKY7 258 aaKnown RBP7.06□□□□□ -1.28
VMA21-203ENST00000477649 DHDHQ9UQ10 334 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 CAMK2AQ9UQM7 478 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 POLR1DQ9Y2S0 133 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 LRP12Q9Y561 859 aa7.06□□□□□ -1.28
VMA21-203ENST00000477649 DNAH14Q0VDD8 3507 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 TMEM269A0A1B0GVZ9 245 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 A0A1W2PPL8 197 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 FUOMA2VDF0 154 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 PMS2P1A4D2B8 440 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 PRR32B1ATL7 298 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 ACOT7O00154 380 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 MAGEB4O15481 346 aaPredicted RBP7.05□□□□□ -1.28
VMA21-203ENST00000477649 NME2P1O60361 137 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 SLC43A1O75387 559 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 SRSF10O75494 262 aaKnown RBP7.05□□□□□ -1.28
VMA21-203ENST00000477649 TRAPPC6AO75865 159 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 SP1P08047 785 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 QDPRP09417 244 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 PRKAR1AP10644 381 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 CD37P11049 281 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 MSR1P21757 451 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms