RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 PTP4A1Q93096 173 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 ZMYND19Q96E35 227 aaPredicted RBP13.39□□□□□ -0.27
SEC13-215ENST00000477547 WFIKKN1Q96NZ8 548 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 RASSF4Q9H2L5 321 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 ZNF226Q9NYT6 803 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 MOKQ9UQ07 419 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 SLC25A15Q9Y619 301 aa13.39□□□□□ -0.27
SEC13-215ENST00000477547 PKDREJQ9NTG1 2253 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 CCDC182A6NF36 153 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 MPZL2O60487 215 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 TFP02787 698 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 SCG5P05408 212 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 CST2P09228 141 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 GNAO1P09471 354 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 CD79AP11912 226 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 KIR2DL3P43628 341 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 BLVRAP53004 296 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 SNRPGP62308 76 aaKnown RBP13.38□□□□□ -0.27
SEC13-215ENST00000477547 ADAM8P78325 824 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 TEKQ02763 1124 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 AQP6Q13520 282 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 SLC36A2Q495M3 483 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 FAM27BQ5VT28 67 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 DMRTC2Q8IXT2 367 aaPredicted RBP13.38□□□□□ -0.27
SEC13-215ENST00000477547 CCDC36Q8IYA8 594 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 C8orf59Q8N0T1 100 aaPredicted RBP13.38□□□□□ -0.27
SEC13-215ENST00000477547 ZNF511Q8NB15 262 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 HSD17B8Q92506 261 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 UBE2FQ969M7 185 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 ZNF582Q96NG8 517 aaPredicted RBP13.38□□□□□ -0.27
SEC13-215ENST00000477547 ZNF416Q9BWM5 594 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 KCNN2Q9H2S1 579 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 NOX3Q9HBY0 568 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 CCNB1IP1Q9NPC3 277 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 MRPL22Q9NWU5 206 aaKnown RBP13.38□□□□□ -0.27
SEC13-215ENST00000477547 ZNF224Q9NZL3 707 aa13.38□□□□□ -0.27
SEC13-215ENST00000477547 H2AFY2Q9P0M6 372 aaPredicted RBP13.38□□□□□ -0.27
SEC13-215ENST00000477547 SLC22A31A6NKX4 558 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 C12orf71A8MTZ7 269 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 RAB36O95755 333 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 HRGP04196 525 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 THBDP07204 575 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 SPARCP09486 303 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 PATE4P0C8F1 98 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 HOXB1P14653 301 aaPredicted RBP13.37□□□□□ -0.27
SEC13-215ENST00000477547 ZNF823P16415 610 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 GABRB1P18505 474 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 GSTT1P30711 240 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 NAA10P41227 235 aaPredicted RBP13.37□□□□□ -0.27
SEC13-215ENST00000477547 LSM6P62312 80 aaKnown RBP13.37□□□□□ -0.27
SEC13-215ENST00000477547 MAD2L1BPQ15013 274 aaPredicted RBP13.37□□□□□ -0.27
SEC13-215ENST00000477547 KCNMB1Q16558 191 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 GSG1Q2KHT4 349 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 KRTAP21-3Q3LHN1 58 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 C1QTNF12Q5T7M4 302 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 TMEM53Q6P2H8 277 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 SEZ6L2Q6UXD5 910 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 B3GLCTQ6Y288 498 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 C22orf34Q6ZV56 151 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 SSX8Q7RTT4 187 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 DPPA2Q7Z7J5 298 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 MDP1Q86V88 176 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 ERI1Q8IV48 349 aaKnown RBP13.37□□□□□ -0.27
SEC13-215ENST00000477547 ACBD4Q8NC06 268 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 OR6N2Q8NGY6 317 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 TFAP2CQ92754 450 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 RFKQ969G6 155 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 DACH2Q96NX9 599 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 INTS14Q96SY0 518 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 ZNF184Q99676 751 aaPredicted RBP13.37□□□□□ -0.27
SEC13-215ENST00000477547 NPAP1Q9NZP6 1156 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 CRIM1Q9NZV1 1036 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 ASH2LQ9UBL3 628 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 AASSQ9UDR5 926 aa13.37□□□□□ -0.27
SEC13-215ENST00000477547 MRPL3P09001 348 aaKnown RBP13.36□□□□□ -0.27
SEC13-215ENST00000477547 ZNF32P17041 273 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 RPS27P42677 84 aaKnown RBP13.36□□□□□ -0.27
SEC13-215ENST00000477547 ENTPD1P49961 510 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 ZNF83P51522 516 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 PCBD1P61457 104 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 PIGFQ07326 219 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 SCRN3Q0VDG4 424 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 MEDAGQ5VYS4 303 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 USP51Q70EK9 711 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 MEPCEQ7L2J0 689 aaKnown RBP13.36□□□□□ -0.27
SEC13-215ENST00000477547 LINC00346Q8IVM7 164 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 FGFBP3Q8TAT2 258 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 APH1BQ8WW43 257 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 FBXO17Q96EF6 278 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 LURAP1Q96LR2 239 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 RNF121Q9H920 327 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 WDR76Q9H967 626 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 MOV10Q9HCE1 1003 aaKnown RBP13.36□□□□□ -0.27
SEC13-215ENST00000477547 CLN6Q9NWW5 311 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 KCNG2Q9UJ96 466 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 LHFPL6Q9Y693 200 aa13.36□□□□□ -0.27
SEC13-215ENST00000477547 M0R1B8 84 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 SELENOFO60613 162 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 ENTPD6O75354 484 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 MMP7P09237 267 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms