RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	DAPL1	A0PJW8	107 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	CASTOR2	A6NHX0	329 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520		A6NJ64	397 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	CD8B2	A6NJW9	211 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	FAM171A2	A8MVW0	826 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	LOC730098	B7Z3J9	87 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520		C9J4A7	227 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	FAM72C	H0Y354	149 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	PYCARD-AS1	I3L0S3	204 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520		J3QRE1	110 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	MASP2	O00187	686 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	SULT2B1	O00204	365 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	PIR	O00625	290 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	GAPDHS	O14556	408 aa	Predicted RBP	4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	INSIG1	O15503	277 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	ZNF208	O43345	1280 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR10H2	O60403	315 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	CYTIP	O60759	359 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	CTNS	O60931	367 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	GCM2	O75603	506 aa	Predicted RBP	4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	ADAP1	O75689	374 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	ZNF432	O94892	652 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	SLCO2B1	O94956	709 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	FARS2	O95363	451 aa	Known RBP	4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR2C1	O95371	312 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	CPSF4	O95639	269 aa	Known RBP	4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	TRBC1	P01850	177 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	PPBP	P02775	128 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	GAPDH	P04406	335 aa	Known RBP	4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	CTSL	P07711	333 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	FAM157C	P0CG43	387 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	LYL1	P12980	280 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	NR2C1	P13056	603 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	HNF1A	P20823	631 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	CXCR1	P25024	350 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	SHC1	P29353	583 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	TACR3	P29371	465 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	DHPS	P49366	369 aa	Predicted RBP	4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	SULT1A1	P50225	295 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	TDGF1P3	P51864	188 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	MVD	P53602	400 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	CRYBA2	P53672	197 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	NDUFA6	P56556	154 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	CLDN12	P56749	244 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	KLF3	P57682	345 aa	Predicted RBP	4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	ACTA2	P62736	377 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	ACTG2	P63267	376 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	HMGCS1	Q01581	520 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	ACSM2A	Q08AH3	577 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	ADIG	Q0VDE8	80 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	LMAN2	Q12907	356 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	PRDX4	Q13162	271 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	SKP2	Q13309	424 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	NFATC2	Q13469	925 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	SERINC3	Q13530	473 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	CBFB	Q13951	182 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	GAMT	Q14353	236 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	MEF2D	Q14814	521 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	SURF2	Q15527	256 aa	Predicted RBP	4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	UPP1	Q16831	310 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	ACSM3	Q53FZ2	586 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	ZNF805	Q5CZA5	627 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	TRIM61	Q5EBN2	209 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	ZNF311	Q5JNZ3	666 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	COA6	Q5JTJ3	125 aa	Known RBP	4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	TMEM69	Q5SWH9	247 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	FAM72A	Q5TYM5	149 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	C9orf57	Q5W0N0	161 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	FRG2	Q64ET8	278 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	ACSM2B	Q68CK6	577 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	DMKN	Q6E0U4	476 aa	Predicted RBP	4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	FAM72D	Q6L9T8	149 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	PAQR6	Q6TCH4	344 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	LCTL	Q6UWM7	567 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	SBSN	Q6UWP8	590 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	BTNL8	Q6UX41	500 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	UNQ9370/PRO34162	Q6UXP9	181 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	FBXW12	Q6X9E4	464 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	LANCL3	Q6ZV70	420 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	COMMD6	Q7Z4G1	85 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	FAM72B	Q86X60	149 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	MUC20	Q8N307	709 aa	Predicted RBP	4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	C10orf111	Q8N326	155 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	BPIFB2	Q8N4F0	458 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	ZDHHC22	Q8N966	263 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	ACOT4	Q8N9L9	421 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	TMEM229B	Q8NBD8	167 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR8G5	Q8NG78	346 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR4K17	Q8NGC6	315 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR4A4P	Q8NGN8	299 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR10Q1	Q8NGQ4	319 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR9A2	Q8NGT5	310 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR52I2	Q8NH67	350 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	APOBEC4	Q8WW27	367 aa	Known RBP	4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	THAP4	Q8WY91	577 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	GCDH	Q92947	438 aa	Predicted RBP	4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	MIB2	Q96AX9	1013 aa		4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	MARS2	Q96GW9	593 aa	Known RBP	4.25	□□□□□ -1.73
PTCD3-212	ENST00000477520	BTF3L4	Q96K17	158 aa		4.25	□□□□□ -1.73

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