RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 CCDC167Q9P0B6 97 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 ARMCX1Q9P291 453 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 ATP6V1HQ9UI12 483 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 NXT1Q9UKK6 140 aaKnown RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 NDUFAF1Q9Y375 327 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 ATG4BQ9Y4P1 393 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 MMACHCQ9Y4U1 282 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 ASB4Q9Y574 426 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 EYSQ5T1H1 3165 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 XIRP2A4UGR9 3374 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 IGLV3-12A0A075B6K2 115 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 LOC100653049A0A140TA62 436 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 A0A1W2PP18 115 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 CCT8L1PA6NM43 557 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 GABRR3A8MPY1 467 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 BBIP1A8MTZ0 92 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 A8MUA0 341 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 IDSB3KWA1 339 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 C21orf140B9A014 251 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 C9JVG2 144 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 RFXANKO14593 260 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 MRASO14807 208 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 AIM2O14862 343 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 PGRMC2O15173 223 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 TBX19O60806 448 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 CTNSO60931 367 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 DNAJB6O75190 326 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 ALOX12BO75342 701 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 ATP5HO75947 161 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 KRT34O76011 436 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 GPR75O95800 540 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 C6orf47O95873 294 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 MT-ND2P03891 347 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 MELTFP08582 738 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 SLC35E2P0CK97 266 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 LIPCP11150 499 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 LAMP1P11279 417 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 FOLR2P14207 255 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 CPMP14384 443 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 NT5EP21589 574 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 GPX3P22352 226 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 CALB2P22676 271 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 IL12AP29459 219 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 RORAP35398 523 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 CHI3L1P36222 383 aaPredicted RBP3.16□□□□□ -1.9
UBR3-209ENST00000477461 FEN1P39748 380 aaKnown RBP3.16□□□□□ -1.9
UBR3-209ENST00000477461 TRPC1P48995 793 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 OR4D2P58180 307 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 BTG2P78543 158 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 FOLH1Q04609 750 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 ART3Q13508 389 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 PDE7AQ13946 482 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 RCAN2Q14206 197 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 NCF4Q15080 339 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 NSDHLQ15738 373 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 MEP1BQ16820 701 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 VPS26BQ4G0F5 336 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 SPANXN4Q5MJ08 99 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.16□□□□□ -1.9
UBR3-209ENST00000477461 ANKRD26P1Q6NSI1 321 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 ANGPTL8Q6UXH0 198 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 SHISA6Q6ZSJ9 500 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 ZNF621Q6ZSS3 439 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 COX15Q7KZN9 410 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 RAB43Q86YS6 212 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 OR4N5Q8IXE1 308 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 RIMKLAQ8IXN7 391 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 ST13P4Q8IZP2 240 aaPredicted RBP3.16□□□□□ -1.9
UBR3-209ENST00000477461 OR8H3Q8N146 312 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 LRRC25Q8N386 305 aaPredicted RBP3.16□□□□□ -1.9
UBR3-209ENST00000477461 NHLRC2Q8NBF2 726 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 PLPP5Q8NEB5 264 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 OR8J2Q8NGG1 315 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 OR4A15Q8NGL6 344 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 OR5M9Q8NGP3 310 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 CT55Q8WUE5 264 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 OR5P2Q8WZ92 322 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 CIDECQ96AQ7 238 aaPredicted RBP3.16□□□□□ -1.9
UBR3-209ENST00000477461 BSCL2Q96G97 398 aaPredicted RBP3.16□□□□□ -1.9
UBR3-209ENST00000477461 ITCHQ96J02 903 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 TEX37Q96LM6 180 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 ZNF578Q96N58 590 aaPredicted RBP3.16□□□□□ -1.9
UBR3-209ENST00000477461 PANX1Q96RD7 426 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 SLC26A1Q9H2B4 701 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 CLMPQ9H6B4 373 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 GPN2Q9H9Y4 310 aaPredicted RBP3.16□□□□□ -1.9
UBR3-209ENST00000477461 EFCAB1Q9HAE3 211 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 C3orf14Q9HBI5 128 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 ABCB10Q9NRK6 738 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.16□□□□□ -1.9
UBR3-209ENST00000477461 GID8Q9NWU2 228 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 TAS2R7Q9NYW3 318 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 COPS7AQ9UBW8 275 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 CTSFQ9UBX1 484 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 BTNL2Q9UIR0 455 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 C3orf18Q9UK00 162 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 GPR132Q9UNW8 380 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 FARSAQ9Y285 508 aaKnown RBP3.16□□□□□ -1.9
UBR3-209ENST00000477461 NEUROG3Q9Y4Z2 214 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 CLCA3PQ9Y6N3 262 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms