RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 CX3CR1P49238 355 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 TMED10P49755 219 aaKnown RBP1.85□□□□□ -2.11
TARDBP-208ENST00000477447 ATP5IP56385 69 aaPredicted RBP1.85□□□□□ -2.11
TARDBP-208ENST00000477447 SLC25A11Q02978 314 aaKnown RBP1.85□□□□□ -2.11
TARDBP-208ENST00000477447 LOXL1Q08397 574 aaPredicted RBP1.85□□□□□ -2.11
TARDBP-208ENST00000477447 PON2Q15165 354 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 IRF4Q15306 451 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 SNRNP35Q16560 246 aaKnown RBP1.85□□□□□ -2.11
TARDBP-208ENST00000477447 COX19Q49B96 90 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 SMUG1Q53HV7 270 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 SASS6Q6UVJ0 657 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 IGFL1Q6UW32 110 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 FBXW12Q6X9E4 464 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 SHISA6Q6ZSJ9 500 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 NTM-AS1Q6ZSK4 140 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 HMGN2P46Q86SG4 172 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 CDR2LQ86X02 465 aaPredicted RBP1.85□□□□□ -2.11
TARDBP-208ENST00000477447 MMAAQ8IVH4 418 aaKnown RBP1.85□□□□□ -2.11
TARDBP-208ENST00000477447 SLC22A9Q8IVM8 553 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 ZFP41Q8N8Y5 198 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 SLC2A14Q8TDB8 520 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 DEDD2Q8WXF8 326 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 NTAN1Q96AB6 310 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 CENPKQ9BS16 269 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 ZNF2Q9BSG1 426 aaPredicted RBP1.85□□□□□ -2.11
TARDBP-208ENST00000477447 RTBDNQ9BSG5 229 aaPredicted RBP1.85□□□□□ -2.11
TARDBP-208ENST00000477447 PKIBQ9C010 78 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 ING2Q9H160 280 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 UBE2ZQ9H832 354 aaPredicted RBP1.85□□□□□ -2.11
TARDBP-208ENST00000477447 TRMT112Q9UI30 125 aaKnown RBP1.85□□□□□ -2.11
TARDBP-208ENST00000477447 IKBKGQ9Y6K9 419 aa1.85□□□□□ -2.11
TARDBP-208ENST00000477447 IGLV1-50A0A075B6I6 118 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 IGLV2-18A0A075B6J9 118 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 TRAV40A0A0B4J280 105 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 HEATR9A2RTY3 570 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 SMCO2A6NFE2 343 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 LRRIQ3A6PVS8 624 aaPredicted RBP1.84□□□□□ -2.11
TARDBP-208ENST00000477447 AIM2O14862 343 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 RBBP9O75884 186 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 CRYGBP07316 175 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 ACSM4P0C7M7 580 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 LINC00869P0C866 280 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 OR5H8P0DN80 308 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 DTYMKP23919 212 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 DCKP27707 260 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 NAA10P41227 235 aaPredicted RBP1.84□□□□□ -2.11
TARDBP-208ENST00000477447 CSNK1EP49674 416 aaKnown RBP1.84□□□□□ -2.11
TARDBP-208ENST00000477447 KRTAP10-10P60014 251 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 ADARB1P78563 741 aaKnown RBP1.84□□□□□ -2.11
TARDBP-208ENST00000477447 PPM1LQ5SGD2 360 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 METTL21CQ5VZV1 264 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 SLC25A34Q6PIV7 304 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 CALHM1Q8IU99 346 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 FBXL13Q8NEE6 735 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 COQ8AQ8NI60 647 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 RGP1Q92546 391 aaPredicted RBP1.84□□□□□ -2.11
TARDBP-208ENST00000477447 ESR2Q92731 530 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 L3HYPDHQ96EM0 354 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 TPD52L3Q96J77 140 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 HPCAL4Q9UM19 191 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 RFNGQ9Y644 331 aa1.84□□□□□ -2.11
TARDBP-208ENST00000477447 MAPK8IP3Q9UPT6 1336 aa1.84□□□□□ -2.12
TARDBP-208ENST00000477447 NUP214P35658 2090 aaPredicted RBP1.84□□□□□ -2.12
TARDBP-208ENST00000477447 CABIN1Q9Y6J0 2220 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 PLA2R1Q13018 1463 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 FAM47DPA6NHR8 397 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 NUPL2O15504 423 aaKnown RBP1.83□□□□□ -2.12
TARDBP-208ENST00000477447 RDH16O75452 317 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 CIB2O75838 187 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 CCNKO75909 580 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 MPZL1O95297 269 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 SERPINA5P05154 406 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 TROVE2P10155 538 aaKnown RBP eCLIP1.83□□□□□ -2.12
TARDBP-208ENST00000477447 ZNF14P17017 642 aaPredicted RBP1.83□□□□□ -2.12
TARDBP-208ENST00000477447 ZNF24P17028 368 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 CALRP27797 417 aaKnown RBP1.83□□□□□ -2.12
TARDBP-208ENST00000477447 FOXN2P32314 431 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 SSTR5P35346 364 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 TNNT2P45379 298 aaPredicted RBP1.83□□□□□ -2.12
TARDBP-208ENST00000477447 RND2P52198 227 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 HMGN5P82970 282 aaKnown RBP1.83□□□□□ -2.12
TARDBP-208ENST00000477447 SAXO2Q658L1 398 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 SLC8B1Q6J4K2 584 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 TAS2R42Q7RTR8 314 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 CNPY4Q8N129 248 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 LYPD1Q8N2G4 141 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 ARRDC1Q8N5I2 433 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 METTL13Q8N6R0 699 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 OR56B2PQ8NGI1 322 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 OR2A1Q8NGT9 310 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 OR8U1Q8NH10 309 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 RNF139Q8WU17 664 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 C15orf40Q8WUR7 153 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 LRRC29Q8WV35 223 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 SEH1LQ96EE3 360 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 DUS3LQ96G46 650 aaKnown RBP1.83□□□□□ -2.12
TARDBP-208ENST00000477447 NARS2Q96I59 477 aaKnown RBP1.83□□□□□ -2.12
TARDBP-208ENST00000477447 NAP1L5Q96NT1 182 aaPredicted RBP1.83□□□□□ -2.12
TARDBP-208ENST00000477447 CAMK2N2Q96S95 79 aa1.83□□□□□ -2.12
TARDBP-208ENST00000477447 MICU1Q9BPX6 476 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms