RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 VNN3Q9NY84 501 aa11.58□□□□□ -0.56
ACTN4-205ENST00000477174 ARRDC5A6NEK1 342 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 H7C1Q1 480 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 RENP00797 406 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 CCL2P13500 99 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 HIST1H1CP16403 213 aaKnown RBP11.57□□□□□ -0.56
ACTN4-205ENST00000477174 APEX1P27695 318 aaKnown RBP11.57□□□□□ -0.56
ACTN4-205ENST00000477174 SELENOVP59797 346 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 KCNMB1Q16558 191 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 LEG1Q6P5S2 330 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 UGT2A3Q6UWM9 527 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 C1orf174Q8IYL3 243 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 OR6V1Q8N148 313 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 SVOPLQ8N434 492 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 PAQR4Q8N4S7 273 aaPredicted RBP11.57□□□□□ -0.56
ACTN4-205ENST00000477174 OR4K13Q8NH42 304 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 GIPC3Q8TF64 312 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 VRK1Q99986 396 aaPredicted RBP11.57□□□□□ -0.56
ACTN4-205ENST00000477174 RHNO1Q9BSD3 238 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 RAB1BQ9H0U4 201 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 WNT5BQ9H1J7 359 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 RERGLQ9H628 205 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 EGLN3Q9H6Z9 239 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 EIF3KQ9UBQ5 218 aaKnown RBP11.57□□□□□ -0.56
ACTN4-205ENST00000477174 B9D1Q9UPM9 204 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 BAIAP2Q9UQB8 552 aa11.57□□□□□ -0.56
ACTN4-205ENST00000477174 COA3Q9Y2R0 106 aaPredicted RBP11.57□□□□□ -0.56
ACTN4-205ENST00000477174 SETD2Q9BYW2 2564 aaPredicted RBP11.56□□□□□ -0.56
ACTN4-205ENST00000477174 LOC100509620A0A075B734 347 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 BHLHE40O14503 412 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 SYNGR3O43761 229 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 GPRIN2O60269 458 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 ICMTO60725 284 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 ERCC1P07992 297 aaPredicted RBP11.56□□□□□ -0.56
ACTN4-205ENST00000477174 COX5BP10606 129 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 GDI2P50395 445 aaKnown RBP11.56□□□□□ -0.56
ACTN4-205ENST00000477174 GLO1Q04760 184 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 SCRN3Q0VDG4 424 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 AQP6Q13520 282 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 CLEC12AQ5QGZ9 265 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 ZBTB46Q86UZ6 589 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 CIARTQ8N365 385 aaPredicted RBP11.56□□□□□ -0.56
ACTN4-205ENST00000477174 LNX2Q8N448 690 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 OR10H5Q8NGA6 315 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 OR10G2Q8NGC3 310 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 OR52E2Q8NGJ4 325 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 AKR7LQ8NHP1 331 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 C11orf40Q8WZ69 217 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 TSSK2Q96PF2 358 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 FEVQ99581 238 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 REG4Q9BYZ8 158 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 MRPL37Q9BZE1 423 aaKnown RBP11.56□□□□□ -0.56
ACTN4-205ENST00000477174 MS4A5Q9H3V2 200 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 SRA1Q9HD15 236 aaKnown RBP11.56□□□□□ -0.56
ACTN4-205ENST00000477174 EMC7Q9NPA0 242 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 DNAJB9Q9UBS3 223 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 FKBP7Q9Y680 259 aa11.56□□□□□ -0.56
ACTN4-205ENST00000477174 NIPBLQ6KC79 2804 aaeCLIP11.56□□□□□ -0.56
ACTN4-205ENST00000477174 IGLV1-36A0A0B4J1U3 117 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 C5orf49A4QMS7 147 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 OR6C68A6NDL8 312 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 DCTN6O00399 190 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 FKBP6O75344 327 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 MPZL1O95297 269 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 CSF3P09919 207 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 FAM157BP0CG42 384 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 ZNF250P15622 560 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 CCNOP22674 350 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 CBX1P83916 185 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.55□□□□□ -0.56
ACTN4-205ENST00000477174 MOGQ16653 247 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 MSMPQ1L6U9 139 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 ZNF362Q5T0B9 420 aaPredicted RBP11.55□□□□□ -0.56
ACTN4-205ENST00000477174 SLC35F1Q5T1Q4 408 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 RGS7BPQ6MZT1 257 aaPredicted RBP11.55□□□□□ -0.56
ACTN4-205ENST00000477174 ZNF774Q6NX45 483 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 ARL9Q6T311 187 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 CLEC2AQ6UVW9 174 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 NPEPL1Q8NDH3 523 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 OR2T33Q8NG76 320 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 NEU4Q8WWR8 484 aaPredicted RBP11.55□□□□□ -0.56
ACTN4-205ENST00000477174 SORCS2Q96PQ0 1159 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 DDOQ99489 341 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 TSSK6Q9BXA6 273 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 PLA2G12AQ9BZM1 189 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 RACGAP1Q9H0H5 632 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 DYNLRB1Q9NP97 96 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 MYOZ1Q9NP98 299 aaPredicted RBP11.55□□□□□ -0.56
ACTN4-205ENST00000477174 PDP1Q9P0J1 537 aaPredicted RBP11.55□□□□□ -0.56
ACTN4-205ENST00000477174 REV1Q9UBZ9 1251 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 DUSP13Q9UII6 198 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 GPR160Q9UJ42 338 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 NDRG4Q9ULP0 352 aaKnown RBP11.55□□□□□ -0.56
ACTN4-205ENST00000477174 CSPG4Q6UVK1 2322 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 ARFGEF3Q5TH69 2177 aa11.55□□□□□ -0.56
ACTN4-205ENST00000477174 ZANQ9Y493 2812 aa11.54□□□□□ -0.56
ACTN4-205ENST00000477174 SMAD7O15105 426 aaKnown RBP11.54□□□□□ -0.56
ACTN4-205ENST00000477174 SGCEO43556 437 aa11.54□□□□□ -0.56
ACTN4-205ENST00000477174 E2F6O75461 281 aa11.54□□□□□ -0.56
ACTN4-205ENST00000477174 LCKP06239 509 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms