RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 GSCP56915 257 aaPredicted RBP3.32□□□□□ -1.88
VPS13D-207ENST00000476169 KRTAP10-11P60412 298 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 RAP1BP61224 184 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 ERVK11-1P61568 191 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 LMO4P61968 165 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 SELENOTP62341 195 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 UBE2IP63279 158 aaKnown RBP3.32□□□□□ -1.88
VPS13D-207ENST00000476169 FCHO2Q0JRZ9 810 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 TWF1Q12792 350 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 ITGB3BPQ13352 177 aaPredicted RBP3.32□□□□□ -1.88
VPS13D-207ENST00000476169 GGTLC2Q14390 218 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 KCTD19Q17RG1 926 aaPredicted RBP3.32□□□□□ -1.88
VPS13D-207ENST00000476169 TMEM30BQ3MIR4 351 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 ZBED5Q49AG3 693 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 C9orf66Q5T8R8 295 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 ZNF691Q5VV52 312 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 OLFML2AQ68BL7 652 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 LEMD1Q68G75 181 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 PTRHD1Q6GMV3 140 aaKnown RBP3.32□□□□□ -1.88
VPS13D-207ENST00000476169 C1orf94Q6P1W5 598 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 GPRIN3Q6ZVF9 776 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 UNC93AQ86WB7 457 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 SKA3Q8IX90 412 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 RDH10Q8IZV5 341 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 MREGQ8N565 214 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 C4orf32Q8N8J7 132 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 Q8NBF4 154 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 OR2A12Q8NGT7 310 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 ITFG1Q8TB96 612 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 LGALS14Q8TCE9 139 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 TMEM239Q8WW34 195 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 TNFRSF14Q92956 283 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 LRRC45Q96CN5 670 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 CENPNQ96H22 339 aaPredicted RBP3.32□□□□□ -1.88
VPS13D-207ENST00000476169 SLC45A3Q96JT2 553 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 C8orf76Q96K31 380 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 C7orf50Q9BRJ6 194 aaKnown RBP3.32□□□□□ -1.88
VPS13D-207ENST00000476169 SRXN1Q9BYN0 137 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 KRTAP4-5Q9BYR2 181 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 CD209Q9NNX6 404 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 CTPS2Q9NRF8 586 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 CLN6Q9NWW5 311 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 CLEC5AQ9NY25 188 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 SLC17A7Q9P2U7 560 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 CLEC2DQ9UHP7 191 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 NXT1Q9UKK6 140 aaKnown RBP3.32□□□□□ -1.88
VPS13D-207ENST00000476169 PTPRTO14522 1441 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 ARHGAP31Q2M1Z3 1444 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 A2ML1A8K2U0 1454 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 KDM5DQ9BY66 1539 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 CFAP74Q9C0B2 1584 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 AK9Q5TCS8 1911 aa3.32□□□□□ -1.88
VPS13D-207ENST00000476169 CDC42BPBQ9Y5S2 1711 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 ITSN2Q9NZM3 1697 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 PTPN23Q9H3S7 1636 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 MAST1Q9Y2H9 1570 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 DUOX2Q9NRD8 1548 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 NPHP4O75161 1426 aaPredicted RBP3.31□□□□□ -1.88
VPS13D-207ENST00000476169 TMEM2Q9UHN6 1383 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 FANCIQ9NVI1 1328 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 IGHV3-16A0A0C4DH30 117 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 PRR23AA6NEV1 266 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 A8MX80 341 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 HACD1B0YJ81 288 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 H3BN98 237 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 SMLR1H3BR10 107 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 K7ENP7 123 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 MRPS12O15235 138 aaKnown RBP3.31□□□□□ -1.88
VPS13D-207ENST00000476169 SNAI2O43623 268 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 EIF3GO75821 320 aaKnown RBP eCLIP3.31□□□□□ -1.88
VPS13D-207ENST00000476169 ZFAND5O76080 213 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 FADS2O95864 444 aaKnown RBP3.31□□□□□ -1.88
VPS13D-207ENST00000476169 CATP04040 527 aaKnown RBP3.31□□□□□ -1.88
VPS13D-207ENST00000476169 ARG1P05089 322 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 GLAP06280 429 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 CFC1BP0CG36 223 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 CFC1P0CG37 223 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 SLC35E2P0CK97 266 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 RD3LP0DJH9 198 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 PGAM1P18669 254 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 CXCR2P25025 360 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 KIR2DS2P43631 304 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 KLK7P49862 253 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 SERPINB8P50452 374 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 SUB1P53999 127 aaKnown RBP eCLIP3.31□□□□□ -1.88
VPS13D-207ENST00000476169 OR2B6P58173 313 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 UBE2G2P60604 165 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 VSNL1P62760 191 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 BCL2L1Q07817 233 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 PIGHQ14442 188 aaPredicted RBP3.31□□□□□ -1.88
VPS13D-207ENST00000476169 NHLRC3Q5JS37 347 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 TPTE2P1Q5T6R2 138 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 DUPD1Q68J44 220 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 ABHD12BQ7Z5M8 362 aaPredicted RBP3.31□□□□□ -1.88
VPS13D-207ENST00000476169 SETD3Q86TU7 594 aaPredicted RBP3.31□□□□□ -1.88
VPS13D-207ENST00000476169 CADM2Q8N3J6 435 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 CYB561A3Q8NBI2 242 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 HSD17B11Q8NBQ5 300 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 DUSP18Q8NEJ0 188 aa3.31□□□□□ -1.88
VPS13D-207ENST00000476169 OR6K6Q8NGW6 343 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms