RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	ZNF619	Q8N2I2	560 aa		3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	SLC43A2	Q8N370	569 aa		3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	CNEP1R1	Q8N9A8	125 aa		3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	TRPV3	Q8NET8	790 aa		3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	OR10G3	Q8NGC4	313 aa		3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	HAUS1	Q96CS2	278 aa		3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	ERGIC2	Q96RQ1	377 aa		3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	VAT1	Q99536	393 aa		3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	EBNA1BP2	Q99848	306 aa	Known RBP	3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	DOHH	Q9BU89	302 aa		3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	AICDA	Q9GZX7	198 aa		3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	FNDC4	Q9H6D8	234 aa	Predicted RBP	3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	ZNF665	Q9H7R5	613 aa		3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	ANO10	Q9NW15	660 aa		3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	AIPL1	Q9NZN9	384 aa		3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	SLC2A6	Q9UGQ3	507 aa		3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	FREM1	Q5H8C1	2179 aa		3.58	□□□□□ -1.84
PRKD3-208	ENST00000475912	TRBV2	A0A0J9YWF9	115 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	hCG_38984	A0A1B0GV85	526 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	CLOCK	O15516	846 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	CST8	O60676	142 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	PSIP1	O75475	530 aa	Known RBP	3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	RNH1	P13489	461 aa	Known RBP	3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	CPN1	P15169	458 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	B4GALT1	P15291	398 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	SLC25A16	P16260	332 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	USF1	P22415	310 aa	Predicted RBP	3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	EDNRA	P25101	427 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	ACKR3	P25106	362 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	IMPA1	P29218	277 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	PTPN6	P29350	595 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	CDKN2B	P42772	138 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	STAR	P49675	285 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	RAB8A	P61006	207 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	TBPL1	P62380	186 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	KLHL30	Q0D2K2	578 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	SPHAR	Q15513	63 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	ACSBG2	Q5FVE4	666 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	CTSL3P	Q5NE16	218 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	AFTPH	Q6ULP2	937 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	CLEC2A	Q6UVW9	174 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	SBSN	Q6UWP8	590 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	HEATR5A	Q86XA9	2040 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	CCDC50	Q8IVM0	306 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	C9orf40	Q8IXQ3	194 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	BANP	Q8N9N5	519 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	MFSD9	Q8NBP5	474 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	FAM83F	Q8NEG4	500 aa	Predicted RBP	3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	OR52K1	Q8NGK4	314 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	OR4L1	Q8NH43	312 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	OR8K3	Q8NH51	312 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	OR4A16	Q8NH70	328 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	TYMSOS	Q8TAI1	123 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	SPPL2A	Q8TCT8	520 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	C10orf105	Q8TEF2	133 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	C11orf24	Q96F05	449 aa	Predicted RBP	3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	ZNF414	Q96IQ9	312 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	FOPNL	Q96NB1	174 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	SLC39A3	Q9BRY0	314 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	SPX	Q9BT56	116 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	TSSK1B	Q9BXA7	367 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	OR8D2	Q9GZM6	311 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	SPNS1	Q9H2V7	528 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	JPT2	Q9H910	190 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	C3orf14	Q9HBI5	128 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	ADAP2	Q9NPF8	381 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	SCN3A	Q9NY46	2000 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	GALP	Q9UBC7	116 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	UBQLN2	Q9UHD9	624 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	C15orf41	Q9Y2V0	281 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	SH3GLB1	Q9Y371	365 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	RNF115	Q9Y4L5	304 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	MMACHC	Q9Y4U1	282 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	IKBKG	Q9Y6K9	419 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	TENM3	Q9P273	2699 aa		3.57	□□□□□ -1.84
PRKD3-208	ENST00000475912	MALRD1	Q5VYJ5	2156 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	EML6	Q6ZMW3	1958 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912		A0A087X0T9	212 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912		A0A1W2PP18	115 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	KLLN	B2CW77	178 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	PSMD12	O00232	456 aa	Predicted RBP	3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	SLC28A1	O00337	649 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	PRMT5	O14744	637 aa	Predicted RBP	3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	SIGLEC5	O15389	551 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	NIPSNAP2	O75323	286 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	LY6H	O94772	140 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	ETHE1	O95571	254 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	ACTL6A	O96019	429 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	TGFA	P01135	160 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	FAM228B	P0C875	321 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	SMIM10L1	P0DMW3	83 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	ANPEP	P15144	967 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	C4BPB	P20851	252 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	TBXA2R	P21731	343 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	FEN1	P39748	380 aa	Known RBP	3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	LHX2	P50458	406 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	NDUFV3	P56181	108 aa	Known RBP	3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	HSD17B7	P56937	341 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	CCZ1B	P86790	482 aa		3.56	□□□□□ -1.84
PRKD3-208	ENST00000475912	CCZ1	P86791	482 aa	Predicted RBP	3.56	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms