RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 LIN7BQ9HAP6 207 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 CENPMQ9NSP4 180 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 MRPS7Q9Y2R9 242 aaKnown RBP13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 R4GMQ9 66 aa13.7□□□□□ -0.22
RPUSD3-215ENST00000475470 TRAV8-7A0A075B6U6 113 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 ANXA2P2A6NMY6 339 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 ANXA2P07355 339 aaKnown RBP13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 ZNF17P17021 662 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 ADRA2CP18825 462 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 KIR2DL3P43628 341 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 HES3Q5TGS1 186 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 LRRTM1Q86UE6 522 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 MRI1Q9BV20 369 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 SEC61A2Q9H9S3 476 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 FBXL3Q9UKT7 428 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 EMC9Q9Y3B6 208 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 PCDHGA9Q9Y5G4 932 aaKnown RBP13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 PCDHGA1Q9Y5H4 931 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 C21orf140B9A014 251 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 EIF1AYO14602 144 aaKnown RBP13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 EEF1E1O43324 174 aaKnown RBP13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 TLX3O43711 291 aaPredicted RBP13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 EIF1BO60739 113 aaKnown RBP13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 UBL3O95164 117 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 H2BFMP0C1H6 154 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 NR4A2P43354 598 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 CYB561P49447 251 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 CLDN12P56749 244 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 OC90Q02509 493 aaPredicted RBP13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 LRFN4Q6PJG9 635 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 DEGS2Q6QHC5 323 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 BAIAP2L2Q6UXY1 529 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 ESPNLQ6ZVH7 1005 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 FCRLAQ7L513 359 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 UBQLNLQ8IYU4 475 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 BEST3Q8N1M1 668 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 MCHR2Q969V1 340 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 THOC3Q96J01 351 aaKnown RBP13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 ZFP3Q96NJ6 502 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 RBFOX1Q9NWB1 397 aaKnown RBP13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 DHDHQ9UQ10 334 aa13.69□□□□□ -0.22
RPUSD3-215ENST00000475470 MED12Q93074 2177 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 A0A0G2JMM0 328 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 A0A1W2PPB8 328 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 A0A1W2PRS3 328 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 KIR3DP1A8MWS1 328 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 EIF1AXP47813 144 aaKnown RBP13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 CLDN17P56750 224 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 RAC1P63000 192 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 CSNK2A1P68400 391 aaPredicted RBP13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 H3F3AP84243 136 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 AGAP6Q5VW22 663 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 ASB18Q6ZVZ8 466 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 TMPRSS12Q86WS5 348 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 DNAAF1Q8NEP3 725 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 AGAP4Q96P64 663 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 NAA11Q9BSU3 229 aaPredicted RBP13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 STMN3Q9NZ72 180 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 CAMK2AQ9UQM7 478 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 ARPC4-TTLL3A0A0A6YYG9 625 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 FAM240BA0A1B0GVZ2 78 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 TMEM269A0A1B0GVZ9 245 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 GJE1A6NN92 205 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 SRD5A2P31213 254 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 GPR85P60893 370 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 PLET1Q6UQ28 207 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 CMTM4Q8IZR5 234 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 OR14L1PQ8NHC6 308 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 RNF133Q8WVZ7 376 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 C1orf198Q9H425 327 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 CYB5R1Q9UHQ9 305 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 POLR1DQ9Y2S0 133 aa13.68□□□□□ -0.22
RPUSD3-215ENST00000475470 LANCL1O43813 399 aa13.67□□□□□ -0.22
RPUSD3-215ENST00000475470 SRSF10O75494 262 aaKnown RBP13.67□□□□□ -0.22
RPUSD3-215ENST00000475470 TNFSF15O95150 251 aa13.67□□□□□ -0.22
RPUSD3-215ENST00000475470 QDPRP09417 244 aa13.67□□□□□ -0.22
RPUSD3-215ENST00000475470 CALCBP10092 127 aa13.67□□□□□ -0.22
RPUSD3-215ENST00000475470 PSMF1Q92530 271 aa13.67□□□□□ -0.22
RPUSD3-215ENST00000475470 TRIM63Q969Q1 353 aa13.67□□□□□ -0.22
RPUSD3-215ENST00000475470 SLAMF6Q96DU3 332 aa13.67□□□□□ -0.22
RPUSD3-215ENST00000475470 ZC3HAV1LQ96H79 300 aaKnown RBP13.67□□□□□ -0.22
RPUSD3-215ENST00000475470 RNF121Q9H920 327 aa13.67□□□□□ -0.22
RPUSD3-215ENST00000475470 OR52A1Q9UKL2 312 aa13.67□□□□□ -0.22
RPUSD3-215ENST00000475470 RBMX2Q9Y388 322 aaKnown RBP13.67□□□□□ -0.22
RPUSD3-215ENST00000475470 MRPS18BQ9Y676 258 aaKnown RBP13.67□□□□□ -0.22
RPUSD3-215ENST00000475470 PCSK5Q92824 1860 aa13.67□□□□□ -0.22
RPUSD3-215ENST00000475470 IGHV3-15A0A0B4J1V0 119 aa13.66□□□□□ -0.22
RPUSD3-215ENST00000475470 CD2P06729 351 aa13.66□□□□□ -0.22
RPUSD3-215ENST00000475470 CDAP32320 146 aa13.66□□□□□ -0.22
RPUSD3-215ENST00000475470 MFAP5Q13361 173 aa13.66□□□□□ -0.22
RPUSD3-215ENST00000475470 SLC25A47Q6Q0C1 308 aa13.66□□□□□ -0.22
RPUSD3-215ENST00000475470 YRDCQ86U90 279 aaKnown RBP13.66□□□□□ -0.22
RPUSD3-215ENST00000475470 OR2AJ1Q8NGZ0 328 aa13.66□□□□□ -0.22
RPUSD3-215ENST00000475470 CHAC2Q8WUX2 184 aa13.66□□□□□ -0.22
RPUSD3-215ENST00000475470 EMC7Q9NPA0 242 aa13.66□□□□□ -0.22
RPUSD3-215ENST00000475470 NPAP1Q9NZP6 1156 aa13.66□□□□□ -0.22
RPUSD3-215ENST00000475470 OR5V1Q9UGF6 321 aa13.66□□□□□ -0.22
RPUSD3-215ENST00000475470 KMT2EQ8IZD2 1858 aa13.66□□□□□ -0.22
RPUSD3-215ENST00000475470 A0A0J9YW62 118 aa13.66□□□□□ -0.22
RPUSD3-215ENST00000475470 MEIOCA2RUB1 952 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms