RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 SGCAQ16586 387 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 TMEM255AQ5JRV8 349 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 FAM27BQ5VT28 67 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 RFPL4BQ6ZWI9 263 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 CROCCP2Q86T23 111 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 SMYD1Q8NB12 490 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 AKR7LQ8NHP1 331 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 FNDC8Q8TC99 324 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 ASB10Q8WXI3 467 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 UBE2FQ969M7 185 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 PLEKHA8Q96JA3 519 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 C4orf45Q96LM5 186 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 WFDC6Q9BQY6 131 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 SLC30A2Q9BRI3 323 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 SSBP3Q9BWW4 388 aaPredicted RBP10.59□□□□□ -0.71
SKA3-206ENST00000475251 CENPHQ9H3R5 247 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 INIPQ9NRY2 104 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 IL19Q9UHD0 177 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 SLC7A7Q9UM01 511 aa10.59□□□□□ -0.71
SKA3-206ENST00000475251 FAM181BA6NEQ2 426 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 SRRM5B3KS81 715 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 HOXA3O43365 443 aaPredicted RBP10.58□□□□□ -0.72
SKA3-206ENST00000475251 NGFP01138 241 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 RPS2P15880 293 aaKnown RBP10.58□□□□□ -0.72
SKA3-206ENST00000475251 CD80P33681 288 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 MRPL19P49406 292 aaKnown RBP10.58□□□□□ -0.72
SKA3-206ENST00000475251 UGT2B15P54855 530 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 RPL15P61313 204 aaKnown RBP10.58□□□□□ -0.72
SKA3-206ENST00000475251 GNB2P62879 340 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 ERVK-25P63136 954 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 RPL18Q07020 188 aaKnown RBP10.58□□□□□ -0.72
SKA3-206ENST00000475251 CD47Q08722 323 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 MPP2Q14168 576 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 PDCD1Q15116 288 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 ZMYND11Q15326 602 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 OLFML2AQ68BL7 652 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 MSRB3Q8IXL7 192 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 MREGQ8N565 214 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 KIR3DL3Q8N743 410 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 ANKRD42Q8N9B4 389 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 C11orf65Q8NCR3 313 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 OR2Z1Q8NG97 314 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 OR6T1Q8NGN1 323 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 NABP1Q96AH0 204 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 SPDL1Q96EA4 605 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 OR52B2Q96RD2 323 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 PKP2Q99959 881 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 CITED1Q99966 193 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 ZNF426Q9BUY5 554 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 OR2H1Q9GZK4 316 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 NOX4Q9NPH5 578 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 DCAF16Q9NXF7 216 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 PDP1Q9P0J1 537 aaPredicted RBP10.58□□□□□ -0.72
SKA3-206ENST00000475251 VAPAQ9P0L0 249 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.58□□□□□ -0.72
SKA3-206ENST00000475251 TIMM10BQ9Y5J6 103 aa10.58□□□□□ -0.72
SKA3-206ENST00000475251 IGHV3OR16-10A0A075B7F0 116 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 IGHV2-70DA0A0C4DH43 119 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 CLPSL1A2RUU4 121 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 NPIPB13A6NJU9 1138 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 CEACAM18A8MTB9 384 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 NPIPB4C9JG80 1138 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 NDUFA7O95182 113 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 SLC2A10O95528 541 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 ABHD16AO95870 558 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 F13BP05160 661 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 CST2P09228 141 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 WNT2P09544 360 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 CD247P20963 164 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 CDAP32320 146 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 PSG7Q13046 419 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 SPRNQ5BIV9 151 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 NLRC3Q7RTR2 1065 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 SLC30A8Q8IWU4 369 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 C10orf111Q8N326 155 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 TMEM86BQ8N661 226 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 RASSF5Q8WWW0 418 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 RAB40AQ8WXH6 277 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 NSMAFQ92636 917 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 COG8Q96MW5 612 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 RBP7Q96R05 134 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 SIGLEC11Q96RL6 698 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 PCDHAC1Q9H158 963 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 PRDM13Q9H4Q3 707 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 TBCCD1Q9NVR7 557 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 KIF17Q9P2E2 1029 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 MIOXQ9UGB7 285 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 UGT2A1Q9Y4X1 527 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 VWFP04275 2813 aa10.57□□□□□ -0.72
SKA3-206ENST00000475251 TMEM178BH3BS89 294 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 POLR3GO15318 223 aaPredicted RBP10.56□□□□□ -0.72
SKA3-206ENST00000475251 ERLIN1O75477 346 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 IGF2P01344 180 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 MT-ND1P03886 318 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 FUT1P19526 365 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 KITLGP21583 273 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 RBM34P42696 430 aaKnown RBP10.56□□□□□ -0.72
SKA3-206ENST00000475251 PCBP3P57721 371 aaKnown RBP10.56□□□□□ -0.72
SKA3-206ENST00000475251 DUSP7Q16829 419 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 TTMPQ5BVD1 217 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms