RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 RPS27P42677 84 aaKnown RBP19.39■□□□□ 0.69
CCM2-206ENST00000474617 GUCA1AP43080 201 aaPredicted RBP19.39■□□□□ 0.69
CCM2-206ENST00000474617 RPS18P62269 152 aaKnown RBP19.39■□□□□ 0.69
CCM2-206ENST00000474617 Q0VFX4 171 aa19.39■□□□□ 0.69
CCM2-206ENST00000474617 TOMM20Q15388 145 aa19.39■□□□□ 0.69
CCM2-206ENST00000474617 OR7E24Q6IFN5 339 aa19.39■□□□□ 0.69
CCM2-206ENST00000474617 CDH24Q86UP0 819 aa19.39■□□□□ 0.69
CCM2-206ENST00000474617 OR2AJ1Q8NGZ0 328 aa19.39■□□□□ 0.69
CCM2-206ENST00000474617 RNF121Q9H920 327 aa19.39■□□□□ 0.69
CCM2-206ENST00000474617 SLC17A5Q9NRA2 495 aa19.39■□□□□ 0.69
CCM2-206ENST00000474617 BOKQ9UMX3 212 aaPredicted RBP19.39■□□□□ 0.69
CCM2-206ENST00000474617 WDR87Q6ZQQ6 2873 aa19.39■□□□□ 0.69
CCM2-206ENST00000474617 FAM240BA0A1B0GVZ2 78 aa19.38■□□□□ 0.69
CCM2-206ENST00000474617 STMND1H3BQB6 276 aa19.38■□□□□ 0.69
CCM2-206ENST00000474617 RAC3P60763 192 aa19.38■□□□□ 0.69
CCM2-206ENST00000474617 LSM6P62312 80 aaKnown RBP19.38■□□□□ 0.69
CCM2-206ENST00000474617 ZNF57Q68EA5 555 aaPredicted RBP19.38■□□□□ 0.69
CCM2-206ENST00000474617 OR5M1Q8NGP8 315 aa19.38■□□□□ 0.69
CCM2-206ENST00000474617 DEDD2Q8WXF8 326 aa19.38■□□□□ 0.69
CCM2-206ENST00000474617 TRIM63Q969Q1 353 aa19.38■□□□□ 0.69
CCM2-206ENST00000474617 GFI1Q99684 422 aa19.38■□□□□ 0.69
CCM2-206ENST00000474617 LIN7BQ9HAP6 207 aa19.38■□□□□ 0.69
CCM2-206ENST00000474617 ZNF275Q9NSD4 429 aaPredicted RBP19.38■□□□□ 0.69
CCM2-206ENST00000474617 COPZ2Q9P299 210 aa19.38■□□□□ 0.69
CCM2-206ENST00000474617 STEAP1Q9UHE8 339 aa19.38■□□□□ 0.69
CCM2-206ENST00000474617 ING1Q9UK53 422 aaPredicted RBP19.38■□□□□ 0.69
CCM2-206ENST00000474617 OR52A1Q9UKL2 312 aa19.38■□□□□ 0.69
CCM2-206ENST00000474617 CDV3Q9UKY7 258 aaKnown RBP19.38■□□□□ 0.69
CCM2-206ENST00000474617 NPIPA2E9PIF3 369 aa19.37■□□□□ 0.69
CCM2-206ENST00000474617 NPIPA3F8WFD2 350 aa19.37■□□□□ 0.69
CCM2-206ENST00000474617 RAD1O60671 282 aa19.37■□□□□ 0.69
CCM2-206ENST00000474617 CNR1P21554 472 aa19.37■□□□□ 0.69
CCM2-206ENST00000474617 SOX2P48431 317 aa19.37■□□□□ 0.69
CCM2-206ENST00000474617 ART1P52961 327 aa19.37■□□□□ 0.69
CCM2-206ENST00000474617 CSRP2Q16527 193 aa19.37■□□□□ 0.69
CCM2-206ENST00000474617 C10orf128Q5T292 105 aa19.37■□□□□ 0.69
CCM2-206ENST00000474617 OR5H6Q8NGV6 325 aa19.37■□□□□ 0.69
CCM2-206ENST00000474617 SLAMF6Q96DU3 332 aa19.37■□□□□ 0.69
CCM2-206ENST00000474617 JSRP1Q96MG2 331 aaPredicted RBP19.37■□□□□ 0.69
CCM2-206ENST00000474617 EMC6Q9BV81 110 aa19.37■□□□□ 0.69
CCM2-206ENST00000474617 OR2B2Q9GZK3 357 aa19.37■□□□□ 0.69
CCM2-206ENST00000474617 SLC25A18Q9H1K4 315 aa19.37■□□□□ 0.69
CCM2-206ENST00000474617 FOXJ2Q9P0K8 574 aa19.37■□□□□ 0.69
CCM2-206ENST00000474617 TMEM269A0A1B0GVZ9 245 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 ZNF878C9JN71 531 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 CD37P11049 281 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 AP3S2P59780 193 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 CAMK2DQ13557 499 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 BCL2L15Q5TBC7 163 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 HES3Q5TGS1 186 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 GLT8D1Q68CQ7 371 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 ESPNLQ6ZVH7 1005 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.36■□□□□ 0.69
CCM2-206ENST00000474617 CELF2-AS1Q8N7Q2 184 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 NKAIN3Q8N8D7 197 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 SMIM4Q8WVI0 70 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 HPS1Q92902 700 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 CREB3L1Q96BA8 519 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 FOXRED1Q96CU9 486 aaPredicted RBP19.36■□□□□ 0.69
CCM2-206ENST00000474617 HAVCR1Q96D42 359 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 FER1L6-AS2Q96M78 137 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 PLEKHA1Q9HB21 404 aa19.36■□□□□ 0.69
CCM2-206ENST00000474617 BOLA2-SMG1P6H3BVE0 249 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 ORC5O43913 435 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 MPZL1O95297 269 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 ECDO95905 644 aaPredicted RBP19.35■□□□□ 0.69
CCM2-206ENST00000474617 PNPP00491 289 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 CSNK1A1P48729 337 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 SUCLG1P53597 346 aaKnown RBP19.35■□□□□ 0.69
CCM2-206ENST00000474617 C19orf57Q0VDD7 668 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 AIMP2Q13155 320 aaKnown RBP19.35■□□□□ 0.69
CCM2-206ENST00000474617 DYRK1AQ13627 763 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 PDSS1Q5T2R2 415 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 ABHD17BQ5VST6 288 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 FOXL2NBQ6ZUU3 175 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 CREB3L2Q70SY1 520 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 MDGA2Q7Z553 956 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 SYT9Q86SS6 491 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 BEST3Q8N1M1 668 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 ASB5Q8WWX0 329 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 TMEM54Q969K7 222 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 FOXN4Q96NZ1 517 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 ABHD1Q96SE0 405 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 ZFP64Q9NPA5 681 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 G6PC2Q9NQR9 355 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 GLTPQ9NZD2 209 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 B4GALT7Q9UBV7 327 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 RCE1Q9Y256 329 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 POLR1DQ9Y2S0 133 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 EMC9Q9Y3B6 208 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 IGKV1D-43A0A0B4J1Z2 117 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 A0A1W2PPL8 197 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 MEIOCA2RUB1 952 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.35■□□□□ 0.69
CCM2-206ENST00000474617 HLA-DMAP28067 261 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 B3GALT5-AS1P59052 145 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 HES5Q5TA89 166 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 ZNF468Q5VIY5 522 aaPredicted RBP19.35■□□□□ 0.69
CCM2-206ENST00000474617 PIP4P1Q86T03 277 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 TMPRSS12Q86WS5 348 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms