RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 SLC35F1Q5T1Q4 408 aa13.76□□□□□ -0.21
ITGB1-210ENST00000474568 OR10H5Q8NGA6 315 aa13.76□□□□□ -0.21
ITGB1-210ENST00000474568 OR4K13Q8NH42 304 aa13.76□□□□□ -0.21
ITGB1-210ENST00000474568 SLC7A6OSQ96CW6 309 aaPredicted RBP13.76□□□□□ -0.21
ITGB1-210ENST00000474568 NMNAT3Q96T66 252 aa13.76□□□□□ -0.21
ITGB1-210ENST00000474568 TRIM15Q9C019 465 aa13.76□□□□□ -0.21
ITGB1-210ENST00000474568 VSX1Q9NZR4 365 aaPredicted RBP13.76□□□□□ -0.21
ITGB1-210ENST00000474568 SAMHD1Q9Y3Z3 626 aaKnown RBP13.76□□□□□ -0.21
ITGB1-210ENST00000474568 TIMM10BQ9Y5J6 103 aa13.76□□□□□ -0.21
ITGB1-210ENST00000474568 C12orf71A8MTZ7 269 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 M0R233 179 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 TXNDC12O95881 172 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 GASTP01350 101 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 HIST1H1CP16403 213 aaKnown RBP13.75□□□□□ -0.21
ITGB1-210ENST00000474568 NOS3P29474 1203 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 WNT5AP41221 380 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 PDLIM4P50479 330 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 UCP2P55851 309 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 PCBD1P61457 104 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 DNAL1Q4LDG9 190 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 OR2T5Q6IEZ7 315 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 ZNF620Q6ZNG0 422 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 ADCK1Q86TW2 530 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 ADGRG5Q8IZF4 528 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 AQP11Q8NBQ7 271 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 SDR9C7Q8NEX9 313 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 OR1J1Q8NGS3 322 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 OR2T29Q8NH02 315 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 C10orf105Q8TEF2 133 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 POM121L2Q96KW2 1035 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 FN3KQ9H479 309 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 REEP1Q9H902 201 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 SRA1Q9HD15 236 aaKnown RBP13.75□□□□□ -0.21
ITGB1-210ENST00000474568 REV1Q9UBZ9 1251 aa13.75□□□□□ -0.21
ITGB1-210ENST00000474568 C2CD3Q4AC94 2353 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 LYNX1G3V0Z9 82 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 DCTN6O00399 190 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 SYNGR3O43761 229 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 AHCYL1O43865 530 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 SNAP29O95721 258 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 ERCC1P07992 297 aaPredicted RBP13.74□□□□□ -0.21
ITGB1-210ENST00000474568 LYNX1P0DP58 116 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 RAP2AP10114 183 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 NAT2P11245 290 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 RAD52P43351 418 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 HMGA2P52926 109 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 KRTAP1-1Q07627 177 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 TRAP1Q12931 704 aaKnown RBP13.74□□□□□ -0.21
ITGB1-210ENST00000474568 MEP1BQ16820 701 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 NKPD1Q17RQ9 610 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 SPATA24Q86W54 205 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 GLB1L2Q8IW92 636 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 ALDH16A1Q8IZ83 802 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 ZNF101Q8IZC7 436 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 C11orf40Q8WZ69 217 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 CHID1Q9BWS9 393 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 PLA2G12AQ9BZM1 189 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 RPRD1BQ9NQG5 326 aaKnown RBP13.74□□□□□ -0.21
ITGB1-210ENST00000474568 TAAR3PQ9P1P4 343 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 EIF3KQ9UBQ5 218 aaKnown RBP13.74□□□□□ -0.21
ITGB1-210ENST00000474568 POLR1DQ9Y2S0 133 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 CDH10Q9Y6N8 788 aa13.74□□□□□ -0.21
ITGB1-210ENST00000474568 ARFGEF3Q5TH69 2177 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 CSPG4Q6UVK1 2322 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 SETD2Q9BYW2 2564 aaPredicted RBP13.73□□□□□ -0.21
ITGB1-210ENST00000474568 A0A096LNT2 108 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 DHRS12A0PJE2 317 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 INAFM1C9JVW0 142 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 DOK2O60496 412 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 SOX14O95416 240 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 RENP00797 406 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 CST1P01037 141 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 TP53P04637 393 aaPredicted RBP13.73□□□□□ -0.21
ITGB1-210ENST00000474568 CSF3P09919 207 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 APEHP13798 732 aaKnown RBP13.73□□□□□ -0.21
ITGB1-210ENST00000474568 DAOP14920 347 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 SLC25A16P16260 332 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 HOXB4P17483 251 aaPredicted RBP13.73□□□□□ -0.21
ITGB1-210ENST00000474568 HTR5AP47898 357 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 FLOT2Q14254 428 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 GGTLC2Q14390 218 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 ZNF770Q6IQ21 691 aaPredicted RBP13.73□□□□□ -0.21
ITGB1-210ENST00000474568 RFPL4BQ6ZWI9 263 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 OR52L1Q8NGH7 329 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 OR52E2Q8NGJ4 325 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 OR8D4Q8NGM9 314 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 ABHD4Q8TB40 342 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 SYNPRQ8TBG9 265 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 CANT1Q8WVQ1 401 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 NEU4Q8WWR8 484 aaPredicted RBP13.73□□□□□ -0.21
ITGB1-210ENST00000474568 GTF3AQ92664 365 aaKnown RBP13.73□□□□□ -0.21
ITGB1-210ENST00000474568 PIMREGQ9BSJ6 248 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 BCL2L14Q9BZR8 327 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 TBC1D23Q9NUY8 699 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 ASH2LQ9UBL3 628 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 B9D1Q9UPM9 204 aa13.73□□□□□ -0.21
ITGB1-210ENST00000474568 GNGT2O14610 69 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 ARPC3O15145 178 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 SGCEO43556 437 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 DNAJC8O75937 253 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms