RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 SLC22A24Q8N4F4 322 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 SYT14Q8NB59 555 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 Q96M85 177 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 ALG12Q9BV10 488 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 PLK3Q9H4B4 646 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 SMURF2Q9HAU4 748 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 MYOZ1Q9NP98 299 aaPredicted RBP16.13■□□□□ 0.17
CCDC171-206ENST00000474193 ZFHX3Q15911 3703 aa16.13■□□□□ 0.17
CCDC171-206ENST00000474193 NAV3Q8IVL0 2385 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 TEX13CA0A0J9YWL9 993 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 SOCS2O14508 198 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 ARPC3O15145 178 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 AHCYL1O43865 530 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 PCSK6P29122 969 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 THBS4P35443 961 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 PDLIM4P50479 330 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 PLP2Q04941 152 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 SNTB2Q13425 540 aaKnown RBP16.12■□□□□ 0.17
CCDC171-206ENST00000474193 KRR1Q13601 381 aaKnown RBP16.12■□□□□ 0.17
CCDC171-206ENST00000474193 MST1LQ2TV78 715 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 KRT80Q6KB66 452 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 LRFN4Q6PJG9 635 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 ZBTB49Q6ZSB9 765 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 ADCK1Q86TW2 530 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 PARP8Q8N3A8 854 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 MAPK1IP1LQ8NDC0 245 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 NOXO1Q8NFA2 376 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 OR10H5Q8NGA6 315 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 HTRA1Q92743 480 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 C1orf198Q9H425 327 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 DYNLRB1Q9NP97 96 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 TMEM38BQ9NVV0 291 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 REV1Q9UBZ9 1251 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 NF1P21359 2839 aa16.12■□□□□ 0.17
CCDC171-206ENST00000474193 CSPG4Q6UVK1 2322 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 SLC22A23A1A5C7 686 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 RENP00797 406 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 NR4A1P22736 598 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 ALDH3A2P51648 485 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 ESRRGP62508 458 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 MYBPC1Q00872 1141 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 HGFACQ04756 655 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 TRIP10Q15642 601 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 CARTPTQ16568 116 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 NRN1LQ496H8 165 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 THEM4Q5T1C6 240 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 KDM4DQ6B0I6 523 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 SLC27A4Q6P1M0 643 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 SLC16A14Q7RTX9 510 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 FAM122BQ7Z309 247 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 SKA3Q8IX90 412 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 CBR4Q8N4T8 237 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 ZNF525Q8N782 197 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 ZNF540Q8NDQ6 660 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 ZNF519Q8TB69 540 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 HDAC2Q92769 488 aaKnown RBP16.11■□□□□ 0.17
CCDC171-206ENST00000474193 MCHR2Q969V1 340 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 MRPL13Q9BYD1 178 aaKnown RBP16.11■□□□□ 0.17
CCDC171-206ENST00000474193 PLA2G12AQ9BZM1 189 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 SEC61A2Q9H9S3 476 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 NOX3Q9HBY0 568 aa16.11■□□□□ 0.17
CCDC171-206ENST00000474193 IGHV4-30-2A0A087WSY4 118 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 IQCMA0A1B0GVH7 501 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 ZNF503-AS2A6NEH8 195 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 NDUFS8O00217 210 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 EI24O14681 340 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 TLX2O43763 284 aaPredicted RBP16.1■□□□□ 0.17
CCDC171-206ENST00000474193 TXNDC12O95881 172 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 IFNGP01579 166 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 SERPINA5P05154 406 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 IGFBP1P08833 259 aaPredicted RBP16.1■□□□□ 0.17
CCDC171-206ENST00000474193 ZNF14P17017 642 aaPredicted RBP16.1■□□□□ 0.17
CCDC171-206ENST00000474193 PPOXP50336 477 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 CRISP1P54107 249 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 RAD23AP54725 363 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 SELENOVP59797 346 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 RUNX1T1Q06455 604 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 RAB39AQ14964 217 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 SLC35F1Q5T1Q4 408 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 LNX2Q8N448 690 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 OR8D4Q8NGM9 314 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 OR1J2Q8NGS2 313 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 NEU4Q8WWR8 484 aaPredicted RBP16.1■□□□□ 0.17
CCDC171-206ENST00000474193 RASD2Q96D21 266 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 KCNK17Q96T54 332 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 PIMREGQ9BSJ6 248 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 PRRG3Q9BZD7 231 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 KLHL21Q9UJP4 597 aa16.1■□□□□ 0.17
CCDC171-206ENST00000474193 PRSS37A4D1T9 235 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 RIIAD1A6NNX1 92 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 BHLHE40O14503 412 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 HMGN1P05114 100 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 GLRXP35754 106 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 GINS1Q14691 196 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 HIST3H3Q16695 136 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 MESTQ5EB52 335 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 LEG1Q6P5S2 330 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 MYPOPQ86VE0 399 aaPredicted RBP16.09■□□□□ 0.17
CCDC171-206ENST00000474193 WDFY1Q8IWB7 410 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 OR52E2Q8NGJ4 325 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms