RNA–Protein interactions for RNA: ENST00000474160.1

SYF2-203, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2

Gene SYF2, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-203ENST00000474160 DNAJC9Q8WXX5 260 aa16.34■□□□□ 0.21
SYF2-203ENST00000474160 C18orf12Q96KH6 178 aa16.34■□□□□ 0.21
SYF2-203ENST00000474160 ZNF416Q9BWM5 594 aa16.34■□□□□ 0.21
SYF2-203ENST00000474160 MYOZ1Q9NP98 299 aaPredicted RBP16.34■□□□□ 0.21
SYF2-203ENST00000474160 E2F6O75461 281 aa16.33■□□□□ 0.2
SYF2-203ENST00000474160 GDI2P50395 445 aaKnown RBP16.33■□□□□ 0.2
SYF2-203ENST00000474160 SELENOVP59797 346 aa16.33■□□□□ 0.2
SYF2-203ENST00000474160 CLEC12BQ2HXU8 276 aa16.33■□□□□ 0.2
SYF2-203ENST00000474160 ARL9Q6T311 187 aa16.33■□□□□ 0.2
SYF2-203ENST00000474160 DNM1P46Q6ZS02 220 aa16.33■□□□□ 0.2
SYF2-203ENST00000474160 IPCEF1Q8WWN9 437 aaPredicted RBP16.33■□□□□ 0.2
SYF2-203ENST00000474160 HTRA1Q92743 480 aa16.33■□□□□ 0.2
SYF2-203ENST00000474160 POM121L2Q96KW2 1035 aa16.33■□□□□ 0.2
SYF2-203ENST00000474160 NMNAT3Q96T66 252 aa16.33■□□□□ 0.2
SYF2-203ENST00000474160 DOK1Q99704 481 aa16.33■□□□□ 0.2
SYF2-203ENST00000474160 EGLN3Q9H6Z9 239 aa16.33■□□□□ 0.2
SYF2-203ENST00000474160 ZNF556Q9HAH1 456 aa16.33■□□□□ 0.2
SYF2-203ENST00000474160 TBC1D23Q9NUY8 699 aa16.33■□□□□ 0.2
SYF2-203ENST00000474160 EIF3KQ9UBQ5 218 aaKnown RBP16.33■□□□□ 0.2
SYF2-203ENST00000474160 KLHL21Q9UJP4 597 aa16.33■□□□□ 0.2
SYF2-203ENST00000474160 B9D1Q9UPM9 204 aa16.33■□□□□ 0.2
SYF2-203ENST00000474160 COA3Q9Y2R0 106 aaPredicted RBP16.33■□□□□ 0.2
SYF2-203ENST00000474160 IGLV1-36A0A0B4J1U3 117 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 H3BSA7 217 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 F12P00748 615 aaPredicted RBP16.32■□□□□ 0.2
SYF2-203ENST00000474160 ANXA8P13928 327 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 TUBG1P23258 451 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 APEX1P27695 318 aaKnown RBP16.32■□□□□ 0.2
SYF2-203ENST00000474160 NUDT6P53370 316 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 UCP2P55851 309 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 PPP1R8Q12972 351 aaKnown RBP16.32■□□□□ 0.2
SYF2-203ENST00000474160 MOGQ16653 247 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 SLC36A3Q495N2 470 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 ARFGEF3Q5TH69 2177 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 C1orf146Q5VVC0 180 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 RGS7BPQ6MZT1 257 aaPredicted RBP16.32■□□□□ 0.2
SYF2-203ENST00000474160 CCDC121Q6ZUS5 278 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 BIVMQ86UB2 503 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 NPEPL1Q8NDH3 523 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 CPEB3Q8NE35 698 aaKnown RBP16.32■□□□□ 0.2
SYF2-203ENST00000474160 OR4K13Q8NH42 304 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 DUS3LQ96G46 650 aaKnown RBP16.32■□□□□ 0.2
SYF2-203ENST00000474160 COX4I2Q96KJ9 171 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 FEVQ99581 238 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 TSSK6Q9BXA6 273 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 RAB1BQ9H0U4 201 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 WNT5BQ9H1J7 359 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 TUBG2Q9NRH3 451 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 ARMC1Q9NVT9 282 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 GPR160Q9UJ42 338 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 KCNG2Q9UJ96 466 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 VPS13CQ709C8 3753 aa16.32■□□□□ 0.2
SYF2-203ENST00000474160 FLNAP21333 2647 aaKnown RBP16.31■□□□□ 0.2
SYF2-203ENST00000474160 SYNGR3O43761 229 aa16.31■□□□□ 0.2
SYF2-203ENST00000474160 CIB2O75838 187 aa16.31■□□□□ 0.2
SYF2-203ENST00000474160 IFNGP01579 166 aa16.31■□□□□ 0.2
SYF2-203ENST00000474160 FCGR1AP12314 374 aa16.31■□□□□ 0.2
SYF2-203ENST00000474160 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.31■□□□□ 0.2
SYF2-203ENST00000474160 CLEC12AQ5QGZ9 265 aa16.31■□□□□ 0.2
SYF2-203ENST00000474160 ASRGL1Q7L266 308 aa16.31■□□□□ 0.2
SYF2-203ENST00000474160 OR6V1Q8N148 313 aa16.31■□□□□ 0.2
SYF2-203ENST00000474160 OR52E2Q8NGJ4 325 aa16.31■□□□□ 0.2
SYF2-203ENST00000474160 OR2T4Q8NH00 348 aa16.31■□□□□ 0.2
SYF2-203ENST00000474160 TEX47Q8TBZ9 253 aa16.31■□□□□ 0.2
SYF2-203ENST00000474160 NEU4Q8WWR8 484 aaPredicted RBP16.31■□□□□ 0.2
SYF2-203ENST00000474160 C11orf40Q8WZ69 217 aa16.31■□□□□ 0.2
SYF2-203ENST00000474160 SLCO4A1Q96BD0 722 aa16.31■□□□□ 0.2
SYF2-203ENST00000474160 MS4A5Q9H3V2 200 aa16.31■□□□□ 0.2
SYF2-203ENST00000474160 RERGLQ9H628 205 aa16.31■□□□□ 0.2
SYF2-203ENST00000474160 ELOVL3Q9HB03 270 aa16.31■□□□□ 0.2
SYF2-203ENST00000474160 PDP1Q9P0J1 537 aaPredicted RBP16.31■□□□□ 0.2
SYF2-203ENST00000474160 GDF2Q9UK05 429 aaPredicted RBP16.31■□□□□ 0.2
SYF2-203ENST00000474160 ZNF469Q96JG9 3925 aaPredicted RBP16.31■□□□□ 0.2
SYF2-203ENST00000474160 TMEM129A0AVI4 362 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 J3QW42 95 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 EBAG9O00559 213 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 SGCEO43556 437 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 GPRIN2O60269 458 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 INHBBP09529 407 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 GAAP10253 952 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 ZNF250P15622 560 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 CENPAP49450 140 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 SHQ1Q6PI26 577 aaKnown RBP16.3■□□□□ 0.2
SYF2-203ENST00000474160 CLEC2AQ6UVW9 174 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 UGT2A3Q6UWM9 527 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 SDR9C7Q8NEX9 313 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 GJC3Q8NFK1 279 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 OR8D4Q8NGM9 314 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 AKR7LQ8NHP1 331 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 COG8Q96MW5 612 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 DCLRE1CQ96SD1 692 aaKnown RBP16.3■□□□□ 0.2
SYF2-203ENST00000474160 DDOQ99489 341 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 NIPSNAP1Q9BPW8 284 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 RHNO1Q9BSD3 238 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 PLA2G12AQ9BZM1 189 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 EMC7Q9NPA0 242 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 RPRD1BQ9NQG5 326 aaKnown RBP16.3■□□□□ 0.2
SYF2-203ENST00000474160 SLCO1C1Q9NYB5 712 aa16.3■□□□□ 0.2
SYF2-203ENST00000474160 IGLV3-9A0A075B6K5 115 aa16.29■□□□□ 0.2
SYF2-203ENST00000474160 C5orf49A4QMS7 147 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms