RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 ERFP50548 548 aa12.26□□□□□ -0.45
VAMP4-203ENST00000474047 GK3PQ14409 553 aa12.26□□□□□ -0.45
VAMP4-203ENST00000474047 SLC35F1Q5T1Q4 408 aa12.26□□□□□ -0.45
VAMP4-203ENST00000474047 RGS7BPQ6MZT1 257 aaPredicted RBP12.26□□□□□ -0.45
VAMP4-203ENST00000474047 FOXL2NBQ6ZUU3 175 aa12.26□□□□□ -0.45
VAMP4-203ENST00000474047 PTCHD4Q6ZW05 846 aa12.26□□□□□ -0.45
VAMP4-203ENST00000474047 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.26□□□□□ -0.45
VAMP4-203ENST00000474047 SYT9Q86SS6 491 aa12.26□□□□□ -0.45
VAMP4-203ENST00000474047 CIARTQ8N365 385 aaPredicted RBP12.26□□□□□ -0.45
VAMP4-203ENST00000474047 CPEB3Q8NE35 698 aaKnown RBP12.26□□□□□ -0.45
VAMP4-203ENST00000474047 GIPC3Q8TF64 312 aa12.26□□□□□ -0.45
VAMP4-203ENST00000474047 C11orf40Q8WZ69 217 aa12.26□□□□□ -0.45
VAMP4-203ENST00000474047 MRPL24Q96A35 216 aaKnown RBP12.26□□□□□ -0.45
VAMP4-203ENST00000474047 NMNAT3Q96T66 252 aa12.26□□□□□ -0.45
VAMP4-203ENST00000474047 SYT3Q9BQG1 590 aa12.26□□□□□ -0.45
VAMP4-203ENST00000474047 WACQ9BTA9 647 aa12.26□□□□□ -0.45
VAMP4-203ENST00000474047 TBC1D23Q9NUY8 699 aa12.26□□□□□ -0.45
VAMP4-203ENST00000474047 FZR1Q9UM11 496 aa12.26□□□□□ -0.45
VAMP4-203ENST00000474047 A0A1W2PPW3 197 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 C5orf49A4QMS7 147 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 RNF223E7ERA6 249 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 SNAP29O95721 258 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 PPOXP50336 477 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 UCP2P55851 309 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 SCRN3Q0VDG4 424 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 CARTPTQ16568 116 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 ZNF774Q6NX45 483 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 UGT2A3Q6UWM9 527 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 CLEC9AQ6UXN8 241 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 RASSF6Q6ZTQ3 369 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 PAQR4Q8N4S7 273 aaPredicted RBP12.25□□□□□ -0.45
VAMP4-203ENST00000474047 OR10G2Q8NGC3 310 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 OR52E2Q8NGJ4 325 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 DOK1Q99704 481 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 REG4Q9BYZ8 158 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 BCL2L14Q9BZR8 327 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 GSX1Q9H4S2 264 aaPredicted RBP12.25□□□□□ -0.45
VAMP4-203ENST00000474047 RPRD1BQ9NQG5 326 aaKnown RBP12.25□□□□□ -0.45
VAMP4-203ENST00000474047 VNN3Q9NY84 501 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 GPR160Q9UJ42 338 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 HLA-DQA2P01906 255 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 ADRA2AP08913 450 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 PCSK6P29122 969 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 ARHGDIAP52565 204 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 CBX1P83916 185 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.25□□□□□ -0.45
VAMP4-203ENST00000474047 ENDOGQ14249 297 aaKnown RBP12.25□□□□□ -0.45
VAMP4-203ENST00000474047 ZNF770Q6IQ21 691 aaPredicted RBP12.25□□□□□ -0.45
VAMP4-203ENST00000474047 ARL9Q6T311 187 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 OR10H5Q8NGA6 315 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 OR1J1Q8NGS3 322 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 FAM168AQ92567 244 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 COX4I2Q96KJ9 171 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 TSSK2Q96PF2 358 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 SORCS2Q96PQ0 1159 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 SMR3AQ99954 134 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 TSSK6Q9BXA6 273 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 MRPL37Q9BZE1 423 aaKnown RBP12.25□□□□□ -0.45
VAMP4-203ENST00000474047 WNT5BQ9H1J7 359 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 FLNAP21333 2647 aaKnown RBP12.25□□□□□ -0.45
VAMP4-203ENST00000474047 ACANP16112 2415 aa12.25□□□□□ -0.45
VAMP4-203ENST00000474047 ARFGEF3Q5TH69 2177 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 TMEM129A0AVI4 362 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 M0R233 179 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 SGCEO43556 437 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 SYNGR3O43761 229 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 DOK2O60496 412 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 FKBP6O75344 327 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 MPZL1O95297 269 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 SOX14O95416 240 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 SCG5P05408 212 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 CSF3P09919 207 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 EVX1P49640 407 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 LSM6P62312 80 aaKnown RBP12.24□□□□□ -0.45
VAMP4-203ENST00000474047 GLO1Q04760 184 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 AQP6Q13520 282 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 ZNF525Q8N782 197 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 SDR9C7Q8NEX9 313 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 SYNPRQ8TBG9 265 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 SNX18Q96RF0 628 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 FEVQ99581 238 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 CDADC1Q9BWV3 514 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 DGCR6LQ9BY27 220 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 MMADHCQ9H3L0 296 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-203ENST00000474047 MS4A5Q9H3V2 200 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 ZNF556Q9HAH1 456 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 IL20Q9NYY1 176 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 PDP1Q9P0J1 537 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-203ENST00000474047 REV1Q9UBZ9 1251 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 NDRG4Q9ULP0 352 aaKnown RBP12.24□□□□□ -0.45
VAMP4-203ENST00000474047 B9D1Q9UPM9 204 aa12.24□□□□□ -0.45
VAMP4-203ENST00000474047 H3BN98 237 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 LY6HO94772 140 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 GCH1P30793 250 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 HTR5AP47898 357 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 PDLIM4P50479 330 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 KLF3P57682 345 aaPredicted RBP12.23□□□□□ -0.45
VAMP4-203ENST00000474047 NKPD1Q17RQ9 610 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 SLC36A3Q495N2 470 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 OTPQ5XKR4 325 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms