RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 UMPSP11172 480 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 CD247P20963 164 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 SLC6A2P23975 617 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 LAP3P28838 519 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 GDI2P50395 445 aaKnown RBP10.55□□□□□ -0.72
TRAF4-209ENST00000473421 ZNF84P51523 738 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 SLC3A1Q07837 685 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 ENDOGQ14249 297 aaKnown RBP10.55□□□□□ -0.72
TRAF4-209ENST00000473421 TMEM155Q4W5P6 130 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 MTX3Q5HYI7 312 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 RUSC1-AS1Q66K80 236 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 ASPHD2Q6ICH7 369 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 TTC33Q6PID6 262 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-209ENST00000473421 SLC25A47Q6Q0C1 308 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 BLOC1S3Q6QNY0 202 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 DLEU7Q6UYE1 221 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 NANOGNBQ7Z5D8 188 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 NKAIN4Q8IVV8 208 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 KIRREL3Q8IZU9 778 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 KLHL36Q8N4N3 616 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 OR2Z1Q8NG97 314 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 ZNF420Q8TAQ5 688 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-209ENST00000473421 UPRTQ96BW1 309 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 CCT8L2Q96SF2 557 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 CPPED1Q9BRF8 314 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-209ENST00000473421 CHIAQ9BZP6 476 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 CCNB1IP1Q9NPC3 277 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 EIF3KQ9UBQ5 218 aaKnown RBP10.55□□□□□ -0.72
TRAF4-209ENST00000473421 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRAF4-209ENST00000473421 ZDHHC8Q9ULC8 765 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 ANGPT4Q9Y264 503 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 GMEB1Q9Y692 573 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 V9GYY5 206 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-209ENST00000473421 TMEM120BA0PK00 339 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 PRORSD1PA6NEY8 169 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 TMEM178BH3BS89 294 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 TIMM8AO60220 97 aaPredicted RBP10.54□□□□□ -0.72
TRAF4-209ENST00000473421 ICMTO60725 284 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 FMO6PO60774 539 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 SHOX2O60902 331 aaPredicted RBP10.54□□□□□ -0.72
TRAF4-209ENST00000473421 TSPAN15O95858 294 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 SELEP16581 610 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 TNFRSF1BP20333 461 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 RAG2P55895 527 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 FIP1L1Q6UN15 594 aaKnown RBP10.54□□□□□ -0.72
TRAF4-209ENST00000473421 MREGQ8N565 214 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 SPICQ8N5J4 248 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 OR10S1Q8NGN2 331 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 TMEM255BQ8WV15 326 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 TAMM41Q96BW9 452 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 SPDL1Q96EA4 605 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 C4orf45Q96LM5 186 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 SAMD8Q96LT4 415 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 ZNF607Q96SK3 696 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 RBM4BQ9BQ04 359 aaKnown RBP10.54□□□□□ -0.72
TRAF4-209ENST00000473421 EBF4Q9BQW3 602 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 CDADC1Q9BWV3 514 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 PRDM13Q9H4Q3 707 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 TMEM165Q9HC07 324 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 CYSLTR2Q9NS75 346 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 CCDC167Q9P0B6 97 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 SLC13A4Q9UKG4 626 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 STARD10Q9Y365 291 aa10.54□□□□□ -0.72
TRAF4-209ENST00000473421 NBEAL2Q6ZNJ1 2754 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 IGHV2-70DA0A0C4DH43 119 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 TRAPPC13A5PLN9 417 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 H0YL77 283 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 RRP9O43818 475 aaKnown RBP10.53□□□□□ -0.72
TRAF4-209ENST00000473421 PIP5K1CO60331 668 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 ENTPD5O75356 428 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 SERPINB7O75635 380 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 CYB5R3P00387 301 aaPredicted RBP10.53□□□□□ -0.72
TRAF4-209ENST00000473421 HIST1H2ABP04908 130 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 TSPAN19P0C672 248 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 PMELP40967 661 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 MTNR1AP48039 350 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 MMP16P51512 607 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 ESCO2Q56NI9 601 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 FAM27BQ5VT28 67 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 OLFML2AQ68BL7 652 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 EPGNQ6UW88 154 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 LYPD2Q6UXB3 125 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 HIST3H2AQ7L7L0 130 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 IGFN1Q86VF2 1251 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 SLC7A6Q92536 515 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 HIST1H2ACQ93077 130 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 CMBLQ96DG6 245 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 OR2V2Q96R30 315 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 NANOGQ9H9S0 305 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 GCM1Q9NP62 436 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 INIPQ9NRY2 104 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 OR5V1Q9UGF6 321 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 PPP1R3CQ9UQK1 317 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 USH1CQ9Y6N9 552 aa10.53□□□□□ -0.72
TRAF4-209ENST00000473421 A0A1W2PRG6 482 aa10.52□□□□□ -0.73
TRAF4-209ENST00000473421 SRRM5B3KS81 715 aa10.52□□□□□ -0.73
TRAF4-209ENST00000473421 MCIDASD6RGH6 385 aa10.52□□□□□ -0.73
TRAF4-209ENST00000473421 ERLIN1O75477 346 aa10.52□□□□□ -0.73
TRAF4-209ENST00000473421 OR7A10O76100 309 aa10.52□□□□□ -0.73
TRAF4-209ENST00000473421 TGDSO95455 350 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms