RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 STX1BP61266 288 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 PUDPQ08623 228 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 FUT5Q11128 374 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 RAB32Q13637 225 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 CCNIQ14094 377 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 PDCD2Q16342 344 aaPredicted RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 MAPK14Q16539 360 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 SRSF7Q16629 238 aaKnown RBP eCLIP2.99□□□□□ -1.93
XRN1-209ENST00000472625 TBC1D28Q2M2D7 210 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 CEACAM16Q2WEN9 425 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 HFEQ30201 348 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 GFOD2Q3B7J2 385 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 UGT3A2Q3SY77 523 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ARMCX4Q5H9R4 360 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ALG10BQ5I7T1 473 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 SPANXN4Q5MJ08 99 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 DCAF12L2Q5VW00 463 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 FAM205BPQ63HN1 556 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 KRT80Q6KB66 452 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 TMEM53Q6P2H8 277 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 FAHD2BQ6P2I3 314 aaPredicted RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 ULK3Q6PHR2 472 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ARL9Q6T311 187 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ZNF813Q6ZN06 617 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 H1FNTQ75WM6 255 aaPredicted RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 PIWIL3Q7Z3Z3 882 aaKnown RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 BCDIN3DQ7Z5W3 292 aaKnown RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 PXKQ7Z7A4 578 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ZER1Q7Z7L7 766 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 MDP1Q86V88 176 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 NUDCD3Q8IVD9 361 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 CLECL1Q8IZS7 167 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 SPICQ8N5J4 248 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 LRRC17Q8N6Y2 441 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 TMEM99Q8N816 258 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 LSMEM1Q8N8F7 131 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 SYT14Q8NB59 555 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 OR6N1Q8NGY5 312 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 OR52P1PQ8NH57 321 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 CLDND2Q8NHS1 167 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 VANGL1Q8TAA9 524 aaPredicted RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 TCP10LQ8TDR4 215 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ST7LQ8TDW4 575 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 C11orf40Q8WZ69 217 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 CNOT9Q92600 299 aaKnown RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 RAB8BQ92930 207 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 POP5Q969H6 163 aaKnown RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 SLC25A28Q96A46 364 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 TRIM44Q96DX7 344 aaPredicted RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 SLC47A1Q96FL8 570 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 FAHD2AQ96GK7 314 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ITCHQ96J02 903 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 MAGEB18Q96M61 343 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 MOGAT1Q96PD6 335 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 OR52E6Q96RD3 313 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ZNF607Q96SK3 696 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 DOK1Q99704 481 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 RHOXF2Q9BQY4 288 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 TXLNGYQ9BZA5 131 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 NUF2Q9BZD4 464 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 SLC38A1Q9H2H9 487 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 KCNN2Q9H2S1 579 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ZNF665Q9H7R5 613 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 MEAF6Q9HAF1 191 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 SAP30LQ9HAJ7 183 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 BCL2L10Q9HD36 194 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 TUBG2Q9NRH3 451 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 DECR2Q9NUI1 292 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 NKIRAS2Q9NYR9 191 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 KIF17Q9P2E2 1029 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 LGALS13Q9UHV8 139 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ZNF443Q9Y2A4 671 aaPredicted RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 KCNE3Q9Y6H6 103 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.99□□□□□ -1.93
XRN1-209ENST00000472625 CR1P17927 2039 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 MGAM2Q2M2H8 2515 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 PLCE1Q9P212 2302 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 A0A087WUJ7 227 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 A0A0G2JK05 382 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 IGHV1-69-2A0A0G2JMI3 117 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 C17orf100A8MU93 164 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 KRTAP29-1A8MX34 341 aaPredicted RBP2.98□□□□□ -1.93
XRN1-209ENST00000472625 FTCDNL1E5RQL4 147 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 CLDN34H7C241 214 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 IFNL4K9M1U5 179 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 M0R3G1 203 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 SURF4O15260 269 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 HDAC3O15379 428 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 TRAF3IP2O43734 574 aaPredicted RBP2.98□□□□□ -1.93
XRN1-209ENST00000472625 FMO6PO60774 539 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 BCAS1O75363 584 aaPredicted RBP2.98□□□□□ -1.93
XRN1-209ENST00000472625 UPK3AO75631 287 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 SLC22A3O75751 556 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 JTBO76095 146 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 MPZL1O95297 269 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 IGHG1P01857 330 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 MBPP02686 304 aaPredicted RBP2.98□□□□□ -1.93
XRN1-209ENST00000472625 SERPINA5P05154 406 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 BCHEP06276 602 aa2.98□□□□□ -1.93
XRN1-209ENST00000472625 OR8G3PP0DMU2 310 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms