RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 SLC16A9Q7RTY1 509 aa14.76□□□□□ -0.05
CCM2-205ENST00000472223 ZNF454Q8N9F8 522 aa14.76□□□□□ -0.05
CCM2-205ENST00000472223 OR51G2Q8NGK0 314 aa14.76□□□□□ -0.05
CCM2-205ENST00000472223 NABP1Q96AH0 204 aa14.76□□□□□ -0.05
CCM2-205ENST00000472223 RNFT2Q96EX2 444 aa14.76□□□□□ -0.05
CCM2-205ENST00000472223 MNTQ99583 582 aa14.76□□□□□ -0.05
CCM2-205ENST00000472223 ZNF416Q9BWM5 594 aa14.76□□□□□ -0.05
CCM2-205ENST00000472223 AASSQ9UDR5 926 aa14.76□□□□□ -0.05
CCM2-205ENST00000472223 BLOC1S6Q9UL45 172 aa14.76□□□□□ -0.05
CCM2-205ENST00000472223 COMMD3-BMI1R4GMX3 469 aa14.76□□□□□ -0.05
CCM2-205ENST00000472223 IQCMA0A1B0GVH7 501 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 PHYHO14832 338 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 FADS2O95864 444 aaKnown RBP14.75□□□□□ -0.05
CCM2-205ENST00000472223 TFP02787 698 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 NUDT6P53370 316 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 RAB1AP62820 205 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 PIGFQ07326 219 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 GGTLC2Q14390 218 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 CDSNQ15517 529 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 MEP1BQ16820 701 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 TEX30Q5JUR7 227 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 B3GLCTQ6Y288 498 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 BPIFB6Q8NFQ5 453 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 ZNRF4Q8WWF5 429 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 MRPL48Q96GC5 212 aaKnown RBP14.75□□□□□ -0.05
CCM2-205ENST00000472223 YIPF3Q9GZM5 350 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 C1orf198Q9H425 327 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 WDR76Q9H967 626 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 ASH2LQ9UBL3 628 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 LAMP5Q9UJQ1 280 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 TPRKBQ9Y3C4 175 aa14.75□□□□□ -0.05
CCM2-205ENST00000472223 CCDC182A6NF36 153 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 EFCAB10A6NFE3 127 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 PRSS44E7EML9 344 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 WBP4O75554 376 aaKnown RBP14.74□□□□□ -0.05
CCM2-205ENST00000472223 HLA-HP01893 362 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 MRPL3P09001 348 aaKnown RBP14.74□□□□□ -0.05
CCM2-205ENST00000472223 DBTP11182 482 aaKnown RBP14.74□□□□□ -0.05
CCM2-205ENST00000472223 NAA10P41227 235 aaPredicted RBP14.74□□□□□ -0.05
CCM2-205ENST00000472223 CXCR4P61073 352 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 ACTC1P68032 377 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 ACTA1P68133 377 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 ZNF91Q05481 1191 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 RAB40BQ12829 278 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 TAF13Q15543 124 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 C6orf141Q5SZD1 244 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 SLC18B1Q6NT16 456 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 UGT2A3Q6UWM9 527 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 THEM6Q8WUY1 208 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 APH1BQ8WW43 257 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 HTRA1Q92743 480 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 ZC3HAV1LQ96H79 300 aaKnown RBP14.74□□□□□ -0.05
CCM2-205ENST00000472223 MARCH7Q9H992 704 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 AMBNQ9NP70 447 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 MRPL22Q9NWU5 206 aaKnown RBP14.74□□□□□ -0.05
CCM2-205ENST00000472223 CHCHD3Q9NX63 227 aaKnown RBP14.74□□□□□ -0.05
CCM2-205ENST00000472223 LRRC42Q9Y546 428 aa14.74□□□□□ -0.05
CCM2-205ENST00000472223 UBR5O95071 2799 aaPredicted RBP14.73□□□□□ -0.05
CCM2-205ENST00000472223 A0A1W2PR80 420 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 ZNF670-ZNF695F2Z2N8 137 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 SELENOFO60613 162 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 SBK2P0C263 348 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 OR2T7P0C7T2 308 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 ZNF32P17041 273 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 KIR2DL3P43628 341 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 TFF3Q07654 80 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 DBPQ10586 325 aaPredicted RBP14.73□□□□□ -0.05
CCM2-205ENST00000472223 EIF2B1Q14232 305 aaKnown RBP14.73□□□□□ -0.05
CCM2-205ENST00000472223 ENDOGQ14249 297 aaKnown RBP14.73□□□□□ -0.05
CCM2-205ENST00000472223 TAB1Q15750 504 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 RBM48Q5RL73 367 aaKnown RBP14.73□□□□□ -0.05
CCM2-205ENST00000472223 KCTD18Q6PI47 426 aaPredicted RBP14.73□□□□□ -0.05
CCM2-205ENST00000472223 DPY19L4Q7Z388 723 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 WFDC8Q8IUA0 241 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.73□□□□□ -0.05
CCM2-205ENST00000472223 SLC35F2Q8IXU6 374 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 TIGD4Q8IY51 512 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 ZNF786Q8N393 782 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 ZNF540Q8NDQ6 660 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 OR10H4Q8NGA5 316 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 OR1J2Q8NGS2 313 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 OR2T27Q8NH04 317 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 FBLIM1Q8WUP2 373 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 ASB17Q8WXJ9 295 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 MYDGFQ969H8 173 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 FBXO17Q96EF6 278 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 DACH2Q96NX9 599 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 KCNS3Q9BQ31 491 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 PLCXD1Q9NUJ7 323 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 PLEK2Q9NYT0 353 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 CYB5R1Q9UHQ9 305 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 HCFC1P51610 2035 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 CACNA1CQ13936 2221 aa14.73□□□□□ -0.05
CCM2-205ENST00000472223 SGCEO43556 437 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 SCG5P05408 212 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 LYNP07948 512 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 CBR1P16152 277 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 SLC15A1P46059 708 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 TUBA1BP68363 451 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 TUBA4AP68366 448 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms