RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SURF4O15260 269 aa15.83■□□□□ 0.12
SORT1-203ENST00000471996 TYROBPO43914 113 aa15.83■□□□□ 0.12
SORT1-203ENST00000471996 SLC1A6P48664 564 aa15.83■□□□□ 0.12
SORT1-203ENST00000471996 TAF11Q15544 211 aa15.83■□□□□ 0.12
SORT1-203ENST00000471996 HHATQ5VTY9 493 aa15.83■□□□□ 0.12
SORT1-203ENST00000471996 ZSCAN4Q8NAM6 433 aaPredicted RBP15.83■□□□□ 0.12
SORT1-203ENST00000471996 VANGL1Q8TAA9 524 aaPredicted RBP15.83■□□□□ 0.12
SORT1-203ENST00000471996 MRAPQ8TCY5 172 aa15.83■□□□□ 0.12
SORT1-203ENST00000471996 NABP1Q96AH0 204 aa15.83■□□□□ 0.12
SORT1-203ENST00000471996 C4orf45Q96LM5 186 aa15.83■□□□□ 0.12
SORT1-203ENST00000471996 OR2V2Q96R30 315 aa15.83■□□□□ 0.12
SORT1-203ENST00000471996 ZNF607Q96SK3 696 aa15.83■□□□□ 0.12
SORT1-203ENST00000471996 RAD21L1Q9H4I0 556 aa15.83■□□□□ 0.12
SORT1-203ENST00000471996 SLCO1B3Q9NPD5 702 aa15.83■□□□□ 0.12
SORT1-203ENST00000471996 LGALS13Q9UHV8 139 aa15.83■□□□□ 0.12
SORT1-203ENST00000471996 UGT2A1Q9Y4X1 527 aa15.83■□□□□ 0.12
SORT1-203ENST00000471996 IFNL4K9M1U5 179 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 CLIC1O00299 241 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 SLC22A3O75751 556 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 ZNF205O95201 554 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 OPN1MWP04001 364 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 OPN1MW2P0DN77 364 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 OPN1MW3P0DN78 364 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 LOXL3P58215 753 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 ERVK-25P63136 954 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 C6orf10Q5SRN2 563 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 Q6ZSV7 163 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 MSANTD1Q6ZTZ1 278 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 RANBP3LQ86VV4 465 aaPredicted RBP15.82■□□□□ 0.12
SORT1-203ENST00000471996 KRT73Q86Y46 540 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 ALDH16A1Q8IZ83 802 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 EIF1ADQ8N9N8 165 aaKnown RBP15.82■□□□□ 0.12
SORT1-203ENST00000471996 OR8B3Q8NGG8 313 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 NFKBIDQ8NI38 313 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 OR8B2Q96RD0 313 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 TMEM246Q9BRR3 403 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 WNT5BQ9H1J7 359 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 C16orf95Q9H693 158 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 PNPOQ9NVS9 261 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 ZNF229Q9UJW7 825 aa15.82■□□□□ 0.12
SORT1-203ENST00000471996 CHP2O43745 196 aa15.81■□□□□ 0.12
SORT1-203ENST00000471996 PIP5K1CO60331 668 aa15.81■□□□□ 0.12
SORT1-203ENST00000471996 TRMUO75648 421 aaKnown RBP15.81■□□□□ 0.12
SORT1-203ENST00000471996 SLC2A10O95528 541 aa15.81■□□□□ 0.12
SORT1-203ENST00000471996 GSTM3P21266 225 aa15.81■□□□□ 0.12
SORT1-203ENST00000471996 KITLGP21583 273 aa15.81■□□□□ 0.12
SORT1-203ENST00000471996 SGCAQ16586 387 aa15.81■□□□□ 0.12
SORT1-203ENST00000471996 VAX1Q5SQQ9 334 aa15.81■□□□□ 0.12
SORT1-203ENST00000471996 ZNF613Q6PF04 617 aa15.81■□□□□ 0.12
SORT1-203ENST00000471996 NLRC3Q7RTR2 1065 aa15.81■□□□□ 0.12
SORT1-203ENST00000471996 C10orf82Q8WW14 230 aa15.81■□□□□ 0.12
SORT1-203ENST00000471996 MAGEB18Q96M61 343 aa15.81■□□□□ 0.12
SORT1-203ENST00000471996 OR2H1Q9GZK4 316 aa15.81■□□□□ 0.12
SORT1-203ENST00000471996 SLC13A4Q9UKG4 626 aa15.81■□□□□ 0.12
SORT1-203ENST00000471996 DNAH3Q8TD57 4116 aa15.81■□□□□ 0.12
SORT1-203ENST00000471996 MCIDASD6RGH6 385 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 IGHV4-59P01825 116 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 HIST1H2ABP04908 130 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 ASAH2BP0C7U1 165 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 ACADSP16219 412 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 PITPNBP48739 271 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 FAM27BQ5VT28 67 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 REEP3Q6NUK4 255 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 ARL9Q6T311 187 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 HIST3H2AQ7L7L0 130 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 ASB10Q8WXI3 467 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 GATAD2BQ8WXI9 593 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 HIST1H2ACQ93077 130 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 PCGF1Q9BSM1 259 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 CDADC1Q9BWV3 514 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 POFUT1Q9H488 388 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 EVA1AQ9H8M9 152 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 SMURF2Q9HAU4 748 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 ACOXLQ9NUZ1 547 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 KIF17Q9P2E2 1029 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 CLN8Q9UBY8 286 aa15.8■□□□□ 0.12
SORT1-203ENST00000471996 IGKV1D-43A0A0B4J1Z2 117 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 CENPVL3A0A0U1RRI6 287 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 A0A1W2PRG6 482 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 PRORSD1PA6NEY8 169 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 P2RY10O00398 339 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 BIRC5O15392 142 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 FMO6PO60774 539 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 FSTL3O95633 263 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 CYB5R3P00387 301 aaPredicted RBP15.79■□□□□ 0.12
SORT1-203ENST00000471996 SFTPBP07988 381 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 IDO1P14902 403 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 TUBG1P23258 451 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 EPHA3P29320 983 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 CFHR2P36980 270 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 IER3P46695 156 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 PCBP3P57721 371 aaKnown RBP15.79■□□□□ 0.12
SORT1-203ENST00000471996 CDK6Q00534 326 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 ZNF404Q494X3 552 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 WDR25Q64LD2 544 aaPredicted RBP15.79■□□□□ 0.12
SORT1-203ENST00000471996 GDPGP1Q6ZNW5 385 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 HDDC2Q7Z4H3 204 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 NPEPL1Q8NDH3 523 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 ZNF420Q8TAQ5 688 aaPredicted RBP15.79■□□□□ 0.12
SORT1-203ENST00000471996 GTF2H4Q92759 462 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms