RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 APLNRP35414 380 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 PPP2R2BQ00005 443 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 CRMP1Q14194 572 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 TBC1D28Q2M2D7 210 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 PABPC1L2AQ5JQF8 200 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 ACSM5Q6NUN0 579 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 SLC30A7Q8NEW0 376 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 NUP37Q8NFH4 326 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 PROKR2Q8NFJ6 384 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 SLC26A10Q8NG04 563 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 OR10H5Q8NGA6 315 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 FBXO17Q96EF6 278 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 CCL19Q99731 98 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 C9orf16Q9BUW7 83 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 NMNAT2Q9BZQ4 307 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 OR2H1Q9GZK4 316 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 ORC6Q9Y5N6 252 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 MYO9AB2RTY4 2548 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 USF3Q68DE3 2245 aa13.11□□□□□ -0.31
SNX13-205ENST00000471744 SURF4O15260 269 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 ATE1O95260 518 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 SNAP29O95721 258 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 HLA-DQA2P01906 255 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 COX5BP10606 129 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 ZNF35P13682 527 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 CALCRP30988 508 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 RPS23P62266 143 aaKnown RBP13.1□□□□□ -0.31
SNX13-205ENST00000471744 PSG4Q00888 419 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 GALK2Q01415 458 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 PTGES3Q15185 160 aaKnown RBP13.1□□□□□ -0.31
SNX13-205ENST00000471744 UNQ6126/PRO20091Q6UXV3 157 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 MYPOPQ86VE0 399 aaPredicted RBP13.1□□□□□ -0.31
SNX13-205ENST00000471744 ZNF584Q8IVC4 421 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 FBXL14Q8N1E6 418 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 SMAP2Q8WU79 429 aaPredicted RBP13.1□□□□□ -0.31
SNX13-205ENST00000471744 C11orf40Q8WZ69 217 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 NRGNQ92686 78 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 MBD6Q96DN6 1003 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 CIB1Q99828 191 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 GRIP2Q9C0E4 1043 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 LIME1Q9H400 295 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 FN3KQ9H479 309 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 CDH20Q9HBT6 801 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 EMC7Q9NPA0 242 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 USE1Q9NZ43 259 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 ATPIF1Q9UII2 106 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 TMEFF2Q9UIK5 374 aaPredicted RBP13.1□□□□□ -0.31
SNX13-205ENST00000471744 NDRG4Q9ULP0 352 aaKnown RBP13.1□□□□□ -0.31
SNX13-205ENST00000471744 PLEKHA6Q9Y2H5 1048 aa13.1□□□□□ -0.31
SNX13-205ENST00000471744 E7EQL1 145 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 PRR23D1E9PI22 279 aaPredicted RBP13.09□□□□□ -0.31
SNX13-205ENST00000471744 SGCEO43556 437 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 BAG2O95816 211 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 SCG5P05408 212 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 PRR23D2P0DMB1 279 aaPredicted RBP13.09□□□□□ -0.31
SNX13-205ENST00000471744 ZNF823P16415 610 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 SPI1P17947 270 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 CD53P19397 219 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 STOMP27105 288 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 FMO3P31513 532 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 APOBEC3AP31941 199 aaPredicted RBP13.09□□□□□ -0.31
SNX13-205ENST00000471744 FABP6P51161 128 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 RAD23AP54725 363 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 TEKQ02763 1124 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 DAG1Q14118 895 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 SNAPC1Q16533 368 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 ARFGEF3Q5TH69 2177 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 AGAP6Q5VW22 663 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 DTX2Q86UW9 622 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 GJC3Q8NFK1 279 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 OR9Q1Q8NGQ5 310 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 TMEM171Q8WVE6 324 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 NEUROG1Q92886 237 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 FOXN4Q96NZ1 517 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 CDADC1Q9BWV3 514 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 GABARAPL3Q9BY60 117 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 WNT5BQ9H1J7 359 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 CXorf56Q9H5V9 222 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 ZNF442Q9H7R0 627 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 BEX4Q9NWD9 120 aaPredicted RBP13.09□□□□□ -0.31
SNX13-205ENST00000471744 ASH2LQ9UBL3 628 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 TEX15Q9BXT5 2789 aa13.09□□□□□ -0.31
SNX13-205ENST00000471744 ERICH4A6NGS2 130 aa13.08□□□□□ -0.32
SNX13-205ENST00000471744 ZAR1LA6NP61 321 aa13.08□□□□□ -0.32
SNX13-205ENST00000471744 EI24O14681 340 aa13.08□□□□□ -0.32
SNX13-205ENST00000471744 PRODHO43272 600 aa13.08□□□□□ -0.32
SNX13-205ENST00000471744 DOK2O60496 412 aa13.08□□□□□ -0.32
SNX13-205ENST00000471744 MITFO75030 526 aaPredicted RBP13.08□□□□□ -0.32
SNX13-205ENST00000471744 MPZL1O95297 269 aa13.08□□□□□ -0.32
SNX13-205ENST00000471744 ALPLP05186 524 aa13.08□□□□□ -0.32
SNX13-205ENST00000471744 DANCRP0C864 163 aa13.08□□□□□ -0.32
SNX13-205ENST00000471744 NR4A1P22736 598 aa13.08□□□□□ -0.32
SNX13-205ENST00000471744 APEX1P27695 318 aaKnown RBP13.08□□□□□ -0.32
SNX13-205ENST00000471744 PCSK6P29122 969 aa13.08□□□□□ -0.32
SNX13-205ENST00000471744 PYCR1P32322 319 aa13.08□□□□□ -0.32
SNX13-205ENST00000471744 TTKP33981 857 aa13.08□□□□□ -0.32
SNX13-205ENST00000471744 GDI2P50395 445 aaKnown RBP13.08□□□□□ -0.32
SNX13-205ENST00000471744 ALDH3A2P51648 485 aa13.08□□□□□ -0.32
SNX13-205ENST00000471744 SLX4IPQ5VYV7 408 aa13.08□□□□□ -0.32
SNX13-205ENST00000471744 UGT2A3Q6UWM9 527 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms