RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 BCAT2O15382 392 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 PIN1P1O15428 100 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 RRP8O43159 456 aaKnown RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 ZNF354AO60765 605 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 CTNSO60931 367 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 SCGNO76038 276 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 DDNO94850 711 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 DKK1O94907 266 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 GLCEO94923 617 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 GPANK1O95872 356 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 FGBP02675 491 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 CATP04040 527 aaKnown RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 RPLP1P05386 114 aaKnown RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 CRHP06850 196 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 SFTPBP07988 381 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ELFN1P0C7U0 828 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TRGC1P0CF51 173 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 EIF1AXP47813 144 aaKnown RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 CAMLGP49069 296 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 SGSHP51688 502 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 UBE2KP61086 200 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 NAAAQ02083 359 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 OR5I1Q13606 314 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 LRRC73Q5JTD7 316 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ARTNQ5T4W7 220 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 LYPLAL1Q5VWZ2 237 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TBC1D3CQ6IPX1 549 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 GDF6Q6KF10 455 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 TMEM220Q6QAJ8 160 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 NPSR1Q6W5P4 371 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TAS1R1Q7RTX1 841 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TMEM150AQ86TG1 271 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ANGPTL5Q86XS5 388 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 DND1Q8IYX4 353 aaKnown RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 ZNF683Q8IZ20 524 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TBC1D3Q8IZP1 549 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 ZNF295-AS1Q8N0V1 137 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ZSCAN4Q8NAM6 433 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 SUMF2Q8NBJ7 301 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ZNF740Q8NDX6 193 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ADAMTS17Q8TE56 1095 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TMEM40Q8WWA1 233 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ROBO4Q8WZ75 1007 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 NTNG2Q96CW9 530 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ZG16BQ96DA0 208 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ELOVL1Q9BW60 279 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 SPATC1LQ9H0A9 340 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 CST11Q9H112 138 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ADGRL4Q9HBW9 690 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 PRDM7Q9NQW5 492 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 SLC7A7Q9UM01 511 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 GPR55Q9Y2T6 319 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 PCYT1BQ9Y5K3 369 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 HELZP42694 1942 aaKnown RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 IGLV3-10A0A075B6K4 115 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TRAV27A0A087WT01 109 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TGIF2-C20orf24A0A0A6YYL0 155 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 A0A1B0GTI1 187 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 PRAMEF27A3QJZ7 478 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TBC1D3BA6NDS4 549 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 UNC119BA6NIH7 251 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 GLOD5A6NK44 160 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 DUXAA6NLW8 204 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 F8VVB4 439 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 F8VWA3 439 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 J3QRE1 110 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ITGB2P05107 769 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ERCC1P07992 297 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 MMP10P09238 476 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TBC1D3HP0C7X1 549 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 CALCBP10092 127 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 MDKP21741 143 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 CHATP28329 748 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 EFNB2P52799 333 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ACTA2P62736 377 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ACTG2P63267 376 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 C9orf64Q5T6V5 341 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TBC1D3GQ6DHY5 549 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 RPL22L1Q6P5R6 122 aaKnown RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 CLEC2AQ6UVW9 174 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 STAC2Q6ZMT1 411 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 LYG2Q86SG7 212 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TMEM173Q86WV6 379 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 C1QL4Q86Z23 238 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 GJD3Q8N144 294 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ZNF283Q8N7M2 679 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 AMER3Q8N944 861 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 BEND2Q8NDZ0 799 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 OR4S1Q8NGB4 309 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 M1APQ8TC57 530 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 C22orf15Q8WYQ4 148 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 EDAQ92838 391 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TMEM159Q96B96 161 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ARSGQ96EG1 525 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 GALNT14Q96FL9 552 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 SLC41A3Q96GZ6 507 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 SMIM8Q96KF7 97 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 GFI1Q99684 422 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 SEPT5Q99719 369 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 HIST1H2BLQ99880 126 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms