RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 ZNF224Q9NZL3 707 aa11□□□□□ -0.65
SPTLC1-204ENST00000469778 RRP15Q9Y3B9 282 aaKnown RBP11□□□□□ -0.65
SPTLC1-204ENST00000469778 RNF115Q9Y4L5 304 aa11□□□□□ -0.65
SPTLC1-204ENST00000469778 GMPPBQ9Y5P6 360 aa11□□□□□ -0.65
SPTLC1-204ENST00000469778 DPRXA6NFQ7 191 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 SLC22A31A6NKX4 558 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 M0R1B8 84 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 SEC14L2O76054 403 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 SNAP29O95721 258 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 ZNF14P17017 642 aaPredicted RBP10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 PEX2P28328 305 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 GSTT1P30711 240 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 POLR2IP36954 125 aaKnown RBP10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 ZNF83P51522 516 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 HIST1H3AP68431 136 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 TLE4Q04727 773 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 PIGFQ07326 219 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 ENDOGQ14249 297 aaKnown RBP10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 HIST2H3PS2Q5TEC6 136 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 LINC01590Q5TEZ4 76 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 AADACL4Q5VUY2 407 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 LPCAT4Q643R3 524 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 ARL9Q6T311 187 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 HIST2H3AQ71DI3 136 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 SHFQ7M4L6 423 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 LRRC18Q8N456 261 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 GALNT4Q8N4A0 578 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 DHRSXQ8N5I4 330 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 TCEANCQ8N8B7 351 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 ZNF454Q8N9F8 522 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 OTULINQ96BN8 352 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 FBXO17Q96EF6 278 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 PIK3IP1Q96FE7 263 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 ZNF75AQ96N20 296 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 MNTQ99583 582 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 TEAD3Q99594 435 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 OR2H1Q9GZK4 316 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 CLEC4MQ9H2X3 399 aaPredicted RBP10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 HINT3Q9NQE9 182 aaKnown RBP10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 NKX1-2Q9UD57 310 aaPredicted RBP10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 WARS2Q9UGM6 360 aaKnown RBP10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 CYB5R1Q9UHQ9 305 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 POLR1DQ9Y2S0 133 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 HSPE1-MOB4S4R3N1 261 aa10.99□□□□□ -0.65
SPTLC1-204ENST00000469778 IGHV1-18A0A0C4DH31 117 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 FAM183AA6NL82 134 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 PRKYO43930 277 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 ATP6V1G2O95670 118 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 TFP02787 698 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 ZNF32P17041 273 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 SLC2A5P22732 501 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 PCSK6P29122 969 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 ENTPD1P49961 510 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 IDH3GP51553 393 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 NUDT6P53370 316 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 ADAM8P78325 824 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 PSG4Q00888 419 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 NAAAQ02083 359 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 BSPH1Q075Z2 132 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 POU4F2Q12837 409 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 OCLNQ16625 522 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 LRRC36Q1X8D7 754 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 TBC1D28Q2M2D7 210 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 ZIK1Q3SY52 487 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 PABPC1L2AQ5JQF8 200 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 ALKBH2Q6NS38 261 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 MEPCEQ7L2J0 689 aaKnown RBP10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 SETD9Q8NE22 299 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 OR9Q1Q8NGQ5 310 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 OR6K6Q8NGW6 343 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 DCLRE1CQ96SD1 692 aaKnown RBP10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 INTS14Q96SY0 518 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 MBOAT4Q96T53 435 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 MYCBPQ99417 103 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 HDHD2Q9H0R4 259 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 OR51V1Q9H2C8 321 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 NPAP1Q9NZP6 1156 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 ASH2LQ9UBL3 628 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 FBXO9Q9UK97 447 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 TMEM14AQ9Y6G1 99 aa10.98□□□□□ -0.65
SPTLC1-204ENST00000469778 A0A1W2PR80 420 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 J3QW42 95 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 ZNF593O00488 134 aaPredicted RBP10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 ABCD4O14678 606 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 SGCEO43556 437 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 ICMTO60725 284 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 MPZL1O95297 269 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 CECR9P0C854 216 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 ZNF35P13682 527 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 STOMP27105 288 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 LOXP28300 417 aaPredicted RBP10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 HTR1FP30939 366 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 PYCR1P32322 319 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 APLNRP35414 380 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 HSPA13P48723 471 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 GDI2P50395 445 aaKnown RBP10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 GGTLC2Q14390 218 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 RAB35Q15286 201 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 KLHL12Q53G59 568 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms