RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 NPDC1Q9NQX5 325 aaPredicted RBP13.14□□□□□ -0.31
CBWD3-205ENST00000469687 MYEF2Q9P2K5 600 aaKnown RBP13.14□□□□□ -0.31
CBWD3-205ENST00000469687 MTFP1Q9UDX5 166 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 NPIPA1Q9UND3 350 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 U3KQA8 63 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 PYCARD-AS1I3L0S3 204 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 SLC17A2O00624 439 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 EIF1AYO14602 144 aaKnown RBP13.14□□□□□ -0.31
CBWD3-205ENST00000469687 GDF9O60383 454 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 BLVRAP53004 296 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 CCL7P80098 99 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 FOXK1P85037 733 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 TLE3Q04726 772 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 RAB11BQ15907 218 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 THOC7Q6I9Y2 204 aaKnown RBP13.14□□□□□ -0.31
CBWD3-205ENST00000469687 FAM166AQ6J272 317 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 LRFN4Q6PJG9 635 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 H1FNTQ75WM6 255 aaPredicted RBP13.14□□□□□ -0.31
CBWD3-205ENST00000469687 RABEPKQ7Z6M1 372 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 MISPQ8IVT2 679 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 ZNF248Q8NDW4 579 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 OR5M1Q8NGP8 315 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 ST7LQ8TDW4 575 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 ST8SIA1Q92185 356 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 SHDQ96IW2 340 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 KCNK17Q96T54 332 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 KLRF1Q9NZS2 232 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 ZNF69Q9UC07 566 aa13.14□□□□□ -0.31
CBWD3-205ENST00000469687 A0A1B0GVI7 797 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 RBBP9O75884 186 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 NDUFB6O95139 128 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 FOSL2P15408 326 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 CFPP27918 469 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 PTGS2P35354 604 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 MAP2K6P52564 334 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 METTL11BQ5VVY1 283 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 TEX261Q6UWH6 196 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 OR10G3Q8NGC4 313 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 NUBPLQ8TB37 319 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 DVL3Q92997 716 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-205ENST00000469687 SLC25A28Q96A46 364 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 SLC25A44Q96H78 314 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-205ENST00000469687 TMEM185BQ9H7F4 350 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 G6PC2Q9NQR9 355 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 EIF3KQ9UBQ5 218 aaKnown RBP13.13□□□□□ -0.31
CBWD3-205ENST00000469687 SCP2D1Q9UJQ7 156 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 ELF5Q9UKW6 265 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-205ENST00000469687 MRPS18BQ9Y676 258 aaKnown RBP13.13□□□□□ -0.31
CBWD3-205ENST00000469687 U3KQ87 197 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 LOC100289279A0A1B0GTE1 492 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 A0A1W2PPC1 479 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 DCDC2BA2VCK2 349 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 PRAF2O60831 178 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 VSIG10L2P0DP72 767 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 EIF1AXP47813 144 aaKnown RBP13.13□□□□□ -0.31
CBWD3-205ENST00000469687 ZNF81P51508 661 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 SCAND1P57086 179 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 HSF1Q00613 529 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 GLYATL3Q5SZD4 288 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 TMEM205Q6UW68 189 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 MFSD8Q8NHS3 518 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 C5orf34Q96MH7 638 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 SLX1AQ9BQ83 275 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 ATG5Q9H1Y0 275 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 MGAT4CQ9UBM8 478 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 CDV3Q9UKY7 258 aaKnown RBP13.13□□□□□ -0.31
CBWD3-205ENST00000469687 R4GMQ9 66 aa13.13□□□□□ -0.31
CBWD3-205ENST00000469687 IGHV5-10-1A0A0J9YXX1 117 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 LOC107986453A0A1B0GWG9 222 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 SIGLEC6O43699 453 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 MPC2O95563 127 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 TPOP07202 933 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 ZNF823P16415 610 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 ZNF24P17028 368 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 IGFBP3P17936 291 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-205ENST00000469687 EPHA8P29322 1005 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-205ENST00000469687 PTGDSP41222 190 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 APOBEC1P41238 236 aaKnown RBP13.12□□□□□ -0.31
CBWD3-205ENST00000469687 EMP2P54851 167 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 DCDP81605 110 aaKnown RBP13.12□□□□□ -0.31
CBWD3-205ENST00000469687 ACY1Q03154 408 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 SPOCK1Q08629 439 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 ZP4Q12836 540 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 OR10K2Q6IF99 312 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 C5orf46Q6UWT4 87 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 ZNF680Q8NEM1 530 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 OR8S1Q8NH09 359 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 CLDN23Q96B33 292 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 CHST11Q9NPF2 352 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 PRMT8Q9NR22 394 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-205ENST00000469687 DIABLOQ9NR28 239 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 CENPMQ9NSP4 180 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 PIPOXQ9P0Z9 390 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 OR52A1Q9UKL2 312 aa13.12□□□□□ -0.31
CBWD3-205ENST00000469687 OR2J2O76002 312 aa13.11□□□□□ -0.31
CBWD3-205ENST00000469687 DHPSP49366 369 aaPredicted RBP13.11□□□□□ -0.31
CBWD3-205ENST00000469687 BIDP55957 195 aa13.11□□□□□ -0.31
CBWD3-205ENST00000469687 ZNF385CQ66K41 422 aaPredicted RBP13.11□□□□□ -0.31
CBWD3-205ENST00000469687 NHLRC1Q6VVB1 395 aa13.11□□□□□ -0.31
CBWD3-205ENST00000469687 ZNF454Q8N9F8 522 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms