RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 NKD1Q969G9 470 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 SLC2A4RGQ9NR83 387 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 C19orf53Q9UNZ5 99 aaPredicted RBP11.2□□□□□ -0.62
USP11-206ENST00000469080 MRPS17Q9Y2R5 130 aaKnown RBP11.2□□□□□ -0.62
USP11-206ENST00000469080 A0A1B0GTH9 108 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 PATE3B3GLJ2 98 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 ZNF593O00488 134 aaPredicted RBP11.2□□□□□ -0.62
USP11-206ENST00000469080 BCAT2O15382 392 aaPredicted RBP11.2□□□□□ -0.62
USP11-206ENST00000469080 THY1P04216 161 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 HOXC4P09017 264 aaPredicted RBP11.2□□□□□ -0.62
USP11-206ENST00000469080 OR8U8P0C7N1 319 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 FOLR1P15328 257 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 OMPP47874 163 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 OR10A3P58181 314 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 NUTF2P61970 127 aaKnown RBP11.2□□□□□ -0.62
USP11-206ENST00000469080 FABP5Q01469 135 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 TGIF1Q15583 401 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 ADAM5Q6NVV9 412 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 NHLRC1Q6VVB1 395 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 EID2Q8N6I1 236 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 UBAC2Q8NBM4 344 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 DIO2Q92813 273 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 CCDC74BQ96LY2 380 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 C2orf88Q9BSF0 95 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 OR11A1Q9GZK7 315 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 TSPAN10Q9H1Z9 355 aaPredicted RBP11.2□□□□□ -0.62
USP11-206ENST00000469080 CBLCQ9ULV8 474 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 PCDHB10Q9UN67 800 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 KCNIP3Q9Y2W7 256 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 APC2O95996 2303 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 H7C1Q1 480 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 CYTIPO60759 359 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 IGKV1D-16P01601 117 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 NID1P14543 1247 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 CXCR1P25024 350 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 CXCL12P48061 93 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 GAMTQ14353 236 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 ZNF227Q86WZ6 799 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 SIAH3Q8IW03 269 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 MORN4Q8NDC4 146 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 DUSP19Q8WTR2 217 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 KLHDC3Q9BQ90 382 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 NAA11Q9BSU3 229 aaPredicted RBP11.19□□□□□ -0.62
USP11-206ENST00000469080 ULBP3Q9BZM4 244 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 PILRAQ9UKJ1 303 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 RNF215Q9Y6U7 377 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 ACOD1A6NK06 481 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 MCIDASD6RGH6 385 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 RCBTB2O95199 551 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 CNR1P21554 472 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 ARRB1P49407 418 aaPredicted RBP11.19□□□□□ -0.62
USP11-206ENST00000469080 RAB5CP51148 216 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 PLCXD2Q0VAA5 305 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 B3GNTL1Q67FW5 361 aaPredicted RBP11.19□□□□□ -0.62
USP11-206ENST00000469080 ZNF770Q6IQ21 691 aaPredicted RBP11.19□□□□□ -0.62
USP11-206ENST00000469080 TMEM71Q6P5X7 295 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 BAIAP2L2Q6UXY1 529 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 RFLNBQ8N5W9 214 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 MAFIPQ8WZ33 124 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 MOAP1Q96BY2 351 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 NECAB3Q96P71 396 aaPredicted RBP11.19□□□□□ -0.62
USP11-206ENST00000469080 CENPMQ9NSP4 180 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 ENTPD2Q9Y5L3 495 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 TGFBR3LH3BV60 316 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 HIST1H1CP16403 213 aaKnown RBP11.19□□□□□ -0.62
USP11-206ENST00000469080 HTR5AP47898 357 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 PSG6Q00889 435 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 E2F1Q01094 437 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 PRAMEF20Q5VT98 475 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 C1orf94Q6P1W5 598 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 SLITRK4Q8IW52 837 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 GPBAR1Q8TDU6 330 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 LRFN5Q96NI6 719 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 MFFQ9GZY8 342 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 CA10Q9NS85 328 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 COPS7AQ9UBW8 275 aa11.19□□□□□ -0.62
USP11-206ENST00000469080 SRFP11831 508 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 FBLP22087 321 aaKnown RBP11.18□□□□□ -0.62
USP11-206ENST00000469080 RAB38P57729 211 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 MPPED2Q15777 294 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 PRICKLE4Q2TBC4 344 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 CARD17Q5XLA6 110 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 ZNF620Q6ZNG0 422 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 MBOAT2Q6ZWT7 520 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 LRRC18Q8N456 261 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 OR1S2Q8NGQ3 325 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 SFXN5Q8TD22 340 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 ANKRD9Q96BM1 317 aaPredicted RBP11.18□□□□□ -0.62
USP11-206ENST00000469080 OR6C1Q96RD1 312 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 NDUFB11Q9NX14 153 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 SERTAD3Q9UJW9 196 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 POLR1DQ9Y2S0 133 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 CYR61O00622 381 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 TNFRSF10CO14798 259 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 RNF13O43567 381 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 IFNGP01579 166 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 PAX6P26367 422 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 BTCP35070 178 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 MAP3K8P41279 467 aa11.18□□□□□ -0.62
USP11-206ENST00000469080 SNTB2Q13425 540 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms