RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ATP6V1FQ16864 119 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF805Q5CZA5 627 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 ALG10BQ5I7T1 473 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 NCMAPQ5T1S8 102 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 C1orf194Q5T5A4 169 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 FKBP1CQ5VVH2 108 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM268Q5VZI3 342 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 C18orf63Q68DL7 685 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 DMKNQ6E0U4 476 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-207ENST00000468925 SLC25A24Q6NUK1 477 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 OPN5Q6U736 354 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 DHRS11Q6UWP2 260 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 SBSNQ6UWP8 590 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 CD300LGQ6UXG3 332 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 UNQ9370/PRO34162Q6UXP9 181 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 NHLRC1Q6VVB1 395 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 WDR88Q6ZMY6 472 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 MTSS1LQ765P7 747 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 MEPCEQ7L2J0 689 aaKnown RBP4.4□□□□□ -1.71
SF3B1-207ENST00000468925 CTU1Q7Z7A3 348 aaKnown RBP4.4□□□□□ -1.71
SF3B1-207ENST00000468925 RTN4RL1Q86UN2 441 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-207ENST00000468925 CACUL1Q86Y37 369 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 MCEMP1Q8IX19 187 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 MMP21Q8N119 569 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM86AQ8N2M4 240 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 C10orf111Q8N326 155 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 PLPP5Q8NEB5 264 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 NUDT10Q8NFP7 164 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 STEAP2Q8NFT2 490 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 OR2T33Q8NG76 320 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 OR10Q1Q8NGQ4 319 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 OR51A7Q8NH64 312 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 OR52I2Q8NH67 350 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 LKAAEAR1Q8TD35 194 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 THAP4Q8WY91 577 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM18Q96B42 140 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 ZBTB8AQ96BR9 441 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 SMIM12Q96EX1 92 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF764Q96H86 408 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM19Q96HH6 336 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 WDR92Q96MX6 357 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 YPEL4Q96NS1 127 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 AQP10Q96PS8 301 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF649Q9BS31 505 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 SLC35A5Q9BS91 424 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 TRMT61BQ9BVS5 477 aaKnown RBP4.4□□□□□ -1.71
SF3B1-207ENST00000468925 ACTRT3Q9BYD9 372 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 LAT2Q9GZY6 243 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 P2RY12Q9H244 342 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 PLK3Q9H4B4 646 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 FN3KRPQ9HA64 309 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 CSNK1G1Q9HCP0 422 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 MEPEQ9NQ76 525 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-207ENST00000468925 GPR27Q9NS67 375 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 OR14J1Q9UGF5 321 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 A4GNTQ9UNA3 340 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 PLA2G2DQ9UNK4 145 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 FLVCR2Q9UPI3 526 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 SLC22A14Q9Y267 594 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 YARS2Q9Y2Z4 477 aaKnown RBP4.4□□□□□ -1.71
SF3B1-207ENST00000468925 PCDHGA5Q9Y5G8 931 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 V9GY05 133 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 ADAMTS20P59510 1910 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 SHROOM3Q8TF72 1996 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 LOC285556D6RIA3 1793 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 RALGAPA2Q2PPJ7 1873 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 KCNE1BA0A087WTH5 132 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 TRBV4-1A0A0J9YWV2 114 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 A0A1W2PPE3 182 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 CPED1A4D0V7 1026 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 CLEC18AA5D8T8 446 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 OR6C76A6NM76 312 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 FAM157AC9JC47 383 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 FAM72CH0Y354 149 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 H0Y8X5 98 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 DVL2O14641 736 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 PHOX2AO14813 284 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 OR1F1O43749 312 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 NARSO43776 548 aaKnown RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 HBP1O60381 514 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 GCM2O75603 506 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 GLSO94925 669 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 YIF1AO95070 293 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF205O95201 554 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 DIRAS3O95661 229 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 IGLV3-25P01717 112 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 THBDP07204 575 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 GJB1P08034 283 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 F7P08709 466 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 SEC11BP0C7V7 166 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 THEGLP0DJG4 465 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 MPC1LP0DKB6 136 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM225BP0DP42 221 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 VSIG10L2P0DP72 767 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ACP5P13686 325 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ATF1P18846 271 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 DTYMKP23919 212 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 EDNRBP24530 442 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ADORA2BP29275 332 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 OR10J1P30954 320 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms