RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 WDR31Q8NA23 367 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 ANKK1Q8NFD2 765 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 MCFD2Q8NI22 146 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 TMEM80Q96HE8 168 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 DNAJC27Q9NZQ0 273 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 CPSF4LA6NMK7 179 aaKnown RBP12.66□□□□□ -0.38
COL27A1-203ENST00000468565 SHISA9B4DS77 424 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 AKAP8O43823 692 aaKnown RBP12.66□□□□□ -0.38
COL27A1-203ENST00000468565 ZNF432O94892 652 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 LYPD3O95274 346 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 MT-ATP6P00846 226 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 TP53P04637 393 aaPredicted RBP12.66□□□□□ -0.38
COL27A1-203ENST00000468565 HSMCR30P0CW71 290 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 CLDN17P56750 224 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 ST3GAL3Q11203 375 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 C1DQ13901 141 aaKnown RBP12.66□□□□□ -0.38
COL27A1-203ENST00000468565 GINS1Q14691 196 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 MED22Q15528 200 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 Q5PR19 223 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 RRM2BQ7LG56 351 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 TCEANCQ8N8B7 351 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 CHPT1Q8WUD6 406 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 ASPNQ9BXN1 380 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 SLIRPQ9GZT3 109 aaKnown RBP12.66□□□□□ -0.38
COL27A1-203ENST00000468565 MMP27Q9H306 513 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 OBP2BQ9NPH6 170 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 ZNF701Q9NV72 531 aaPredicted RBP12.66□□□□□ -0.38
COL27A1-203ENST00000468565 MRPL39Q9NYK5 338 aaKnown RBP12.66□□□□□ -0.38
COL27A1-203ENST00000468565 TVP23BQ9NYZ1 205 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 PMF1-BGLAPU3KQ54 211 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 A0A1W2PR80 420 aa12.65□□□□□ -0.38
COL27A1-203ENST00000468565 TRAPPC13A5PLN9 417 aa12.65□□□□□ -0.38
COL27A1-203ENST00000468565 MS4A18H0YCH9 400 aa12.65□□□□□ -0.38
COL27A1-203ENST00000468565 ABCD4O14678 606 aa12.65□□□□□ -0.38
COL27A1-203ENST00000468565 TRAF3IP2O43734 574 aaPredicted RBP12.65□□□□□ -0.38
COL27A1-203ENST00000468565 DANCRP0C864 163 aa12.65□□□□□ -0.38
COL27A1-203ENST00000468565 PTH2RP49190 550 aa12.65□□□□□ -0.38
COL27A1-203ENST00000468565 ZNF83P51522 516 aa12.65□□□□□ -0.38
COL27A1-203ENST00000468565 PRPS1P60891 318 aa12.65□□□□□ -0.38
COL27A1-203ENST00000468565 MS4A18Q3C1V0 323 aa12.65□□□□□ -0.38
COL27A1-203ENST00000468565 SLC25A30Q5SVS4 291 aa12.65□□□□□ -0.38
COL27A1-203ENST00000468565 ZNF730Q6ZMV8 503 aa12.65□□□□□ -0.38
COL27A1-203ENST00000468565 TEX47Q8TBZ9 253 aa12.65□□□□□ -0.38
COL27A1-203ENST00000468565 NEUROG1Q92886 237 aa12.65□□□□□ -0.38
COL27A1-203ENST00000468565 ALKBH3Q96Q83 286 aaPredicted RBP12.65□□□□□ -0.38
COL27A1-203ENST00000468565 MGLLQ99685 303 aa12.65□□□□□ -0.38
COL27A1-203ENST00000468565 A3GALT2U3KPV4 340 aa12.65□□□□□ -0.38
COL27A1-203ENST00000468565 LOC100506127A0A0U1RQW1 187 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 RPL36A-HNRNPH2H7BZ11 118 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 CCRL2O00421 344 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 KPNA4O00629 521 aaPredicted RBP12.64□□□□□ -0.39
COL27A1-203ENST00000468565 MAGEB3O15480 346 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 SLC43A1O75387 559 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 UPK3AO75631 287 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 SULT1C4O75897 302 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 WNT11O96014 354 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 THY1P04216 161 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 OCM2P0CE71 109 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 OCMP0CE72 109 aaPredicted RBP12.64□□□□□ -0.39
COL27A1-203ENST00000468565 CD40P25942 277 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 GIPRP48546 466 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 RPS4XP62701 263 aaKnown RBP12.64□□□□□ -0.39
COL27A1-203ENST00000468565 CDK5Q00535 292 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 ZNF91Q05481 1191 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 ZNF404Q494X3 552 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 RNLSQ5VYX0 342 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 KLHL24Q6TFL4 600 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 WDR88Q6ZMY6 472 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 DCDC5Q6ZRR9 648 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 UEVLDQ8IX04 471 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 CENPSQ8N2Z9 138 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 OR1K1Q8NGR3 316 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 SMAP2Q8WU79 429 aaPredicted RBP12.64□□□□□ -0.39
COL27A1-203ENST00000468565 PERPQ96FX8 193 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 MOGAT1Q96PD6 335 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 ZNF426Q9BUY5 554 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 TSSK6Q9BXA6 273 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 PRRG3Q9BZD7 231 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 SLC19A3Q9BZV2 496 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 POLR2J2Q9GZM3 115 aaKnown RBP12.64□□□□□ -0.39
COL27A1-203ENST00000468565 CCDC59Q9P031 241 aaKnown RBP12.64□□□□□ -0.39
COL27A1-203ENST00000468565 LAMP3Q9UQV4 416 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 A0A087WUU8 490 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 IRGMA1A4Y4 181 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 DBTP11182 482 aaKnown RBP12.64□□□□□ -0.39
COL27A1-203ENST00000468565 BMP4P12644 408 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 CDH11P55287 796 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 LGALS3BPQ08380 585 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 TSPAN31Q12999 210 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 TSTQ16762 297 aaKnown RBP12.64□□□□□ -0.39
COL27A1-203ENST00000468565 LINGO2Q7L985 606 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 MFSD4AQ8N468 514 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 IQCF1Q8N6M8 205 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 OR5M11Q96RB7 305 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 MND1Q9BWT6 205 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 OR51E2Q9H255 320 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 RHBDL2Q9NX52 303 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 CISD1Q9NZ45 108 aaKnown RBP12.64□□□□□ -0.39
COL27A1-203ENST00000468565 SLC7A7Q9UM01 511 aa12.64□□□□□ -0.39
COL27A1-203ENST00000468565 MTORP42345 2549 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms