RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 NDUFB11Q9NX14 153 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 ABI3Q9P2A4 366 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 MSRB2Q9Y3D2 182 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 ALPK2Q86TB3 2170 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 A0A0U1RQK1 487 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 A0A1W2PPW3 197 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF320A2RRD8 509 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 FUOMA2VDF0 154 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 FAM166BA8MTA8 275 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 ATXN7O15265 892 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-208ENST00000468300 KLK10O43240 276 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 GPX5O75715 221 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 SLC35A1P78382 337 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 NFATC3Q12968 1075 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 SLC17A1Q14916 467 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 PCGF3Q3KNV8 242 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF766Q5HY98 468 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 FDX2Q6P4F2 183 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 CDC20BQ86Y33 519 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 ACBD7Q8N6N7 88 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 RAB2BQ8WUD1 216 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 OXGR1Q96P68 337 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 TXN2Q99757 166 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 ALG8Q9BVK2 526 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 MOKQ9UQ07 419 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 LOC100506127A0A0U1RQW1 187 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 A0A1W2PRG6 482 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 J3QW42 95 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 MPZL1O95297 269 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 WNT11O96014 354 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 GAAP10253 952 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 NAA10P41227 235 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-208ENST00000468300 SLC16A1P53985 500 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 RPS7P62081 194 aaKnown RBP7.34□□□□□ -1.23
BRCA1-208ENST00000468300 NCS1P62166 190 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 POU4F2Q12837 409 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 TPBGQ13641 420 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 PON3Q15166 354 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 POU4F3Q15319 338 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 PHYHD1Q5SRE7 291 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 SLC25A24Q6NUK1 477 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 PLXDC2Q6UX71 529 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 P2RY8Q86VZ1 359 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 POMGNT2Q8NAT1 580 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 FOXN4Q96NZ1 517 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 CNN2Q99439 309 aaKnown RBP7.34□□□□□ -1.23
BRCA1-208ENST00000468300 CDADC1Q9BWV3 514 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 PARD6GQ9BYG4 376 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-208ENST00000468300 SLC6A15Q9H2J7 730 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 ZDHHC11Q9H8X9 412 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 PTTG2Q9NZH5 202 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 KLF13Q9Y2Y9 288 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-208ENST00000468300 PMF1-BGLAPU3KQ54 211 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 A0A087WV48 116 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 hCG_1807616A0A1W2PRN6 198 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF716A6NP11 495 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 CCRL2O00421 344 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 TRAPPC6AO75865 159 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF432O94892 652 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 RNF224P0DH78 156 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF708P17019 499 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 BIDP55957 195 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 OR12D2P58182 307 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 RAC3P60763 192 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 HTD2P86397 168 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 PMP22Q01453 160 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 THEM4Q5T1C6 240 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 CREB3L2Q70SY1 520 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 SLC35F2Q8IXU6 374 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 RPS4Y2Q8TD47 263 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF385AQ96PM9 386 aaKnown RBP7.34□□□□□ -1.23
BRCA1-208ENST00000468300 AMELYQ99218 206 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 INPP5EQ9NRR6 644 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 SNTG1Q9NSN8 517 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 FKBP7Q9Y680 259 aa7.34□□□□□ -1.23
BRCA1-208ENST00000468300 SERTM2A0A1B0GWG4 89 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 CCDC160A6NGH7 325 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 TVP23AA6NH52 213 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 DVL2O14641 736 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 SLC16A7O60669 478 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 OR6A2O95222 327 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 ABHD16AO95870 558 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 OR2T7P0C7T2 308 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 MYL12AP19105 171 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 RPS27P42677 84 aaKnown RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 DAP3P51398 398 aaKnown RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 CASP6P55212 293 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 ARG2P78540 354 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 LSAMPQ13449 338 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 PCK2Q16822 640 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 SAPCD1Q5SSQ6 148 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 LCN1P1Q5VSP4 162 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 LIPKQ5VXJ0 399 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 ABLIM2Q6H8Q1 611 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 CD200R1LQ6Q8B3 271 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 SLC16A9Q7RTY1 509 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 ERI1Q8IV48 349 aaKnown RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 TMEM123Q8N131 208 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 ZFP41Q8N8Y5 198 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 SYT14Q8NB59 555 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms