RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 TSLPQ969D9 159 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 SLC46A1Q96NT5 459 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 RTN4RQ9BZR6 473 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 CHST6Q9GZX3 395 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 LAT2Q9GZY6 243 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 SHARPINQ9H0F6 387 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 ARL6Q9H0F7 186 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 FGF21Q9NSA1 209 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 COL5A1P20908 1838 aaPredicted RBP13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 LAMA1P25391 3075 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 FXYD6-FXYD2A0A087WZ82 144 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 IGKV3D-11A0A0A0MRZ8 115 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 A0A1B0GX78 115 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 ITGB2P05107 769 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 LPLP06858 475 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 CCKBRP32239 447 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 MEP1BQ16820 701 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 KRT77Q7Z794 578 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 COQ8AQ8NI60 647 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 ZNF563Q8TA94 476 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 RNF128Q8TEB7 428 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 TSEN15Q8WW01 171 aaKnown RBP13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 ASB17Q8WXJ9 295 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 ASB13Q8WXK3 278 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 SLC25A28Q96A46 364 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 ZNF501Q96CX3 271 aaPredicted RBP13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 OR8D2Q9GZM6 311 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 FXYD6Q9H0Q3 95 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 MED11Q9P086 117 aa13.25□□□□□ -0.29
PRPF38B-204ENST00000467302 MEIS3P1A6NDR6 274 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 TRIM77I1YAP6 450 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 YKT6O15498 198 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 PNPP00491 289 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 PDGFBP01127 241 aaPredicted RBP13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 CD37P11049 281 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 NUP62P37198 522 aaPredicted RBP13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 VWA2Q5GFL6 755 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 ARHGAP40Q5TG30 622 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 C1orf189Q5VU69 101 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 C1QL3Q5VWW1 255 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 STEAP1BQ6NZ63 245 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 TMEM71Q6P5X7 295 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 TMEM81Q6P7N7 255 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 GSG1LQ6UXU4 331 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 ZNF679Q8IYX0 411 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 LHFPL5Q8TAF8 219 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 SAP25Q8TEE9 199 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 DMRTA2Q96SC8 542 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 CDV3Q9UKY7 258 aaKnown RBP13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 B9D1Q9UPM9 204 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 SLC22A13Q9Y226 551 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 CACNA1CQ13936 2221 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 CABIN1Q9Y6J0 2220 aa13.24□□□□□ -0.29
PRPF38B-204ENST00000467302 CPED1A4D0V7 1026 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 POM121CA8CG34 1229 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 LAMTOR5O43504 91 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 FGF2P09038 288 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 FBXO45P0C2W1 286 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 RPA2P15927 270 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 ROM1Q03395 351 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 ZNF117Q03924 483 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 SQSTM1Q13501 440 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 GK2Q14410 553 aaPredicted RBP13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 ELAVL1Q15717 326 aaKnown RBP13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 OTPQ5XKR4 325 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 ZNF660Q6AZW8 331 aaPredicted RBP13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 SLC35D2Q76EJ3 337 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 GABRG1Q8N1C3 465 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 OR6M1Q8NGM8 313 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 OR1J4Q8NGS1 313 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 TNFAIP8L1Q8WVP5 186 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 DVL3Q92997 716 aaPredicted RBP13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 SRPK3Q9UPE1 567 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 SESN1Q9Y6P5 492 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 ARID1BQ8NFD5 2236 aaPredicted RBP13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 UNC13CQ8NB66 2214 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 ASXL3Q9C0F0 2248 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 TCRBV16S1A1N1A0A5B0 115 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 PRSS37A4D1T9 235 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 FRG2CA6NGY1 282 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 KRBOX1C9JBD0 128 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 H3BUI4 141 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 SULT1C2O00338 296 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 ICOSLGO75144 302 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 AQP8O94778 261 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 PTGS2P35354 604 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 SLC6A8P48029 635 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 GMFBP60983 142 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 NSDHLQ15738 373 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 TOMM34Q15785 309 aaPredicted RBP13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 TMEM225Q6GV28 225 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 OR6K3Q8NGY3 331 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 OR1S1Q8NH92 325 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 ZNF519Q8TB69 540 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 EDAQ92838 391 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 PPP1R14AQ96A00 147 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 ADIPOR1Q96A54 375 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 C8orf44Q96CB5 159 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 SEH1LQ96EE3 360 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 ADOQ96SZ5 270 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms