RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 MRPL1Q9BYD6 325 aaKnown RBP4.63□□□□□ -1.67
PTCD3-207ENST00000467273 CTDSP1Q9GZU7 261 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 PLAC1Q9HBJ0 212 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 UBQLN4Q9NRR5 601 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 FAM212BQ9NTI7 297 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-207ENST00000467273 GAR1Q9NY12 217 aaKnown RBP4.63□□□□□ -1.67
PTCD3-207ENST00000467273 FLRT3Q9NZU0 649 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 SLC17A6Q9P2U8 582 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 STX18Q9P2W9 335 aaKnown RBP4.63□□□□□ -1.67
PTCD3-207ENST00000467273 CRNNQ9UBG3 495 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-207ENST00000467273 SLC25A10Q9UBX3 287 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-207ENST00000467273 PPIAL4AQ9Y536 164 aa4.63□□□□□ -1.67
PTCD3-207ENST00000467273 COL7A1Q02388 2944 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 A0A075B6Q4 140 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 PPIAL4EA0A075B759 164 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 PPIAL4CA0A0B4J2A2 164 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 A0A1W2PN81 502 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 A0A1W2PPW3 197 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 OOEPA6NGQ2 149 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 SH2D7A6NKC9 451 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-207ENST00000467273 SUPT3HB4E1H0 165 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 PPIAL4DF5H284 164 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 F8WDY8 70 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 hCG_2039718K7EN88 272 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 MRPL33O75394 65 aaKnown RBP4.62□□□□□ -1.67
PTCD3-207ENST00000467273 SUPT3HO75486 399 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 ABHD2P08910 425 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 ALDOCP09972 364 aaKnown RBP4.62□□□□□ -1.67
PTCD3-207ENST00000467273 PPIAL4FP0DN26 164 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 NPR2P20594 1047 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 CALB2P22676 271 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 EDNRAP25101 427 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 FKBP2P26885 142 aaKnown RBP4.62□□□□□ -1.67
PTCD3-207ENST00000467273 SHC1P29353 583 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 CHRNA7P36544 502 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 SLC15A1P46059 708 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 MNAT1P51948 309 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 ATP5IP56385 69 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-207ENST00000467273 VBP1P61758 197 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 ZP4Q12836 540 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 FOXF1Q12946 379 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 GTF2H2Q13888 395 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF273Q14593 569 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 HEPACAMQ14CZ8 416 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 TMEM176BQ3YBM2 270 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-207ENST00000467273 GGTA1PQ4G0N0 100 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 GPAT3Q53EU6 434 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 IGSF11Q5DX21 431 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 KPRPQ5T749 579 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-207ENST00000467273 DCAF12L2Q5VW00 463 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 GTF2H2CQ6P1K8 395 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 TMEM65Q6PI78 240 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 ABHD12BQ7Z5M8 362 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-207ENST00000467273 ISCA2Q86U28 154 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 FAM185AQ8N0U4 392 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 OR2L13Q8N349 312 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 RIBC1Q8N443 379 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-207ENST00000467273 MMGT1Q8N4V1 131 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 CCDC63Q8NA47 563 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 OR7G2Q8NG99 324 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 OR4F5Q8NH21 305 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 OR4C3Q8NH37 302 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 PIGXQ8TBF5 258 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 RDH5Q92781 318 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 POP5Q969H6 163 aaKnown RBP4.62□□□□□ -1.67
PTCD3-207ENST00000467273 ZHX1-C8orf76Q96EF9 292 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 DAZAP1Q96EP5 407 aaKnown RBP4.62□□□□□ -1.67
PTCD3-207ENST00000467273 SLC38A2Q96QD8 506 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF300Q96RE9 604 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-207ENST00000467273 GPR22Q99680 433 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 KRTAP1-5Q9BYS1 174 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 ALG9Q9H6U8 611 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 ANKRA2Q9H9E1 313 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 BEX1Q9HBH7 125 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 LPAR2Q9HBW0 351 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 DYNLRB1Q9NP97 96 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 ARL8BQ9NVJ2 186 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 TAS2R7Q9NYW3 318 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 PDP1Q9P0J1 537 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-207ENST00000467273 RNF11Q9Y3C5 154 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 TIMM22Q9Y584 194 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 MAB21L2Q9Y586 359 aa4.62□□□□□ -1.67
PTCD3-207ENST00000467273 IGHV3-15A0A0B4J1V0 119 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 IGHV1-18A0A0C4DH31 117 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 A0A1W2PR80 420 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 TMEM129A0AVI4 362 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 FAM90A7PA6NKC0 464 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 FAM90A22PA8MWA6 464 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 FAM90A12PA8MX19 464 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 FAM90A23PA8MXZ1 464 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 WRBO00258 174 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 UPK1AO00322 258 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 SYNGR3O43761 229 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 EFNA2O43921 213 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 RBMXL2O75526 392 aaKnown RBP4.61□□□□□ -1.67
PTCD3-207ENST00000467273 SEC14L2O76054 403 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 NKX2-2O95096 273 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 MPZL1O95297 269 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 IGLV1-44P01699 117 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 IGLV2-14P01704 120 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms