RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 PLPPR1Q8TBJ4 325 aa2□□□□□ -2.09
SMC4-207ENST00000467263 CNDP1Q96KN2 507 aa2□□□□□ -2.09
SMC4-207ENST00000467263 FBXO6Q9NRD1 293 aaPredicted RBP2□□□□□ -2.09
SMC4-207ENST00000467263 ING4Q9UNL4 249 aa2□□□□□ -2.09
SMC4-207ENST00000467263 GPR89AB7ZAQ6 455 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 BPY2O14599 106 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 CLIC3O95833 236 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 HLA-DQA1P01909 254 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 SERPIND1P05546 499 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 PTMAP06454 111 aaKnown RBP1.99□□□□□ -2.09
SMC4-207ENST00000467263 GPR89BP0CG08 455 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 CCNB1P14635 433 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 SSTR5P35346 364 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 CEACAM3P40198 252 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 CXCL12P48061 93 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 MRPS22P82650 360 aaKnown RBP1.99□□□□□ -2.09
SMC4-207ENST00000467263 ZNF616Q08AN1 781 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 IFT88Q13099 833 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 SLC39A6Q13433 755 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 LRRC23Q53EV4 343 aaPredicted RBP1.99□□□□□ -2.09
SMC4-207ENST00000467263 ORMDL2Q53FV1 153 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 CCDC73Q6ZRK6 1079 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 MS4A15Q8N5U1 240 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 LRRC52Q8N7C0 313 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 ZFP41Q8N8Y5 198 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 OR2L3Q8NG85 312 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 CIRBP-AS1Q8TBR5 109 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 PIBF1Q8WXW3 757 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 ZNF488Q96MN9 340 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 TIMM17AQ99595 171 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 ZNF717Q9BY31 904 aaPredicted RBP1.99□□□□□ -2.09
SMC4-207ENST00000467263 IKZF2Q9UKS7 526 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 SIGLEC9Q9Y336 463 aa1.99□□□□□ -2.09
SMC4-207ENST00000467263 KIR2DS1A0A191URI9 304 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 ARHGEF35A5YM69 484 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 LGALS9O00182 355 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 EEDO75530 441 aaKnown RBP1.98□□□□□ -2.09
SMC4-207ENST00000467263 SURF6O75683 361 aaKnown RBP1.98□□□□□ -2.09
SMC4-207ENST00000467263 IGHDP01880 384 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 OR5H8P0DN80 308 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 HNMTP50135 292 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 PRRX1P54821 245 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 CDH17Q12864 832 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 CHIT1Q13231 466 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 RCAN2Q14206 197 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 KIR2DS1Q14954 304 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 TAF7Q15545 349 aaPredicted RBP1.98□□□□□ -2.09
SMC4-207ENST00000467263 WDFY1Q8IWB7 410 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 MIR7-3HGQ8N6C7 128 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 METTL13Q8N6R0 699 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 LILRB4Q8NHJ6 448 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 PIFOQ8TCI5 191 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 RTN4IP1Q8WWV3 396 aaPredicted RBP1.98□□□□□ -2.09
SMC4-207ENST00000467263 NTAN1Q96AB6 310 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 TRIM44Q96DX7 344 aaPredicted RBP1.98□□□□□ -2.09
SMC4-207ENST00000467263 PKNOX2Q96KN3 472 aa1.98□□□□□ -2.09
SMC4-207ENST00000467263 LSM7Q9UK45 103 aaKnown RBP1.98□□□□□ -2.09
SMC4-207ENST00000467263 TSSC4Q9Y5U2 329 aaPredicted RBP1.98□□□□□ -2.09
SMC4-207ENST00000467263 IGKV3D-11A0A0A0MRZ8 115 aa1.97□□□□□ -2.09
SMC4-207ENST00000467263 CDC7O00311 574 aa1.97□□□□□ -2.09
SMC4-207ENST00000467263 ZNF250P15622 560 aa1.97□□□□□ -2.09
SMC4-207ENST00000467263 PRMT2P55345 433 aa1.97□□□□□ -2.09
SMC4-207ENST00000467263 UBE2NP61088 152 aaKnown RBP1.97□□□□□ -2.09
SMC4-207ENST00000467263 SLC25A11Q02978 314 aaKnown RBP1.97□□□□□ -2.09
SMC4-207ENST00000467263 CTSL3PQ5NE16 218 aa1.97□□□□□ -2.09
SMC4-207ENST00000467263 KDELC1Q6UW63 502 aa1.97□□□□□ -2.09
SMC4-207ENST00000467263 NIPA1Q7RTP0 329 aa1.97□□□□□ -2.09
SMC4-207ENST00000467263 EGFL6Q8IUX8 553 aa1.97□□□□□ -2.09
SMC4-207ENST00000467263 EIF1ADQ8N9N8 165 aaKnown RBP1.97□□□□□ -2.09
SMC4-207ENST00000467263 OR52D1Q9H346 318 aa1.97□□□□□ -2.09
SMC4-207ENST00000467263 SLC38A10Q9HBR0 1119 aa1.97□□□□□ -2.09
SMC4-207ENST00000467263 GOLT1BQ9Y3E0 138 aa1.97□□□□□ -2.09
SMC4-207ENST00000467263 C5orf63A6NC05 138 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 L7N2F9 121 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 UBXN8O00124 270 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 MRPS12O15235 138 aaKnown RBP1.96□□□□□ -2.1
SMC4-207ENST00000467263 IGKV1D-16P01601 117 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 CD74P04233 296 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 MX1P20591 662 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 CD34P28906 385 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 HNRNPH3P31942 346 aaKnown RBP1.96□□□□□ -2.1
SMC4-207ENST00000467263 CASP14P31944 242 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 SSR4P51571 173 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 RND2P52198 227 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 ARFIP1P53367 373 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 PLP1P60201 277 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 AP1ARQ63HQ0 302 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 UNQ9165/PRO28630Q6UXU0 137 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 ZNF547Q8IVP9 402 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 LIX1Q8N485 282 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 OR6N1Q8NGY5 312 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 OR13G1Q8NGZ3 307 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 ZNF502Q8TBZ5 544 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 SLC7A13Q8TCU3 470 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 MRGPRFQ96AM1 343 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 ETNK2Q9NVF9 386 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 SUN2Q9UH99 717 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 TRMT112Q9UI30 125 aaKnown RBP1.96□□□□□ -2.1
SMC4-207ENST00000467263 HYOU1Q9Y4L1 999 aa1.96□□□□□ -2.1
SMC4-207ENST00000467263 MAPK8IP3Q9UPT6 1336 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms