RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 APH1BQ8WW43 257 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 FBXO17Q96EF6 278 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 WFIKKN1Q96NZ8 548 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 PSMG3-AS1Q96PY0 264 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 INTS14Q96SY0 518 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 COL12A1Q99715 3063 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 SH3GL3Q99963 347 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 MED18Q9BUE0 208 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 RASSF1Q9NS23 344 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 CLN6Q9NWW5 311 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 DNAJC27Q9NZQ0 273 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 CYB5R1Q9UHQ9 305 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 ZNF503-AS2A6NEH8 195 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 ENTPD6O75354 484 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 WBP4O75554 376 aaKnown RBP13.25□□□□□ -0.29
NPHP4-205ENST00000466897 GPANK1O95872 356 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 IGLV1-44P01699 117 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 THBDP07204 575 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 CBR1P16152 277 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 ZNF823P16415 610 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 RPS7P62081 194 aaKnown RBP13.25□□□□□ -0.29
NPHP4-205ENST00000466897 HIST1H3AP68431 136 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 ADAM8P78325 824 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 SCRN3Q0VDG4 424 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 DBPQ10586 325 aaPredicted RBP13.25□□□□□ -0.29
NPHP4-205ENST00000466897 HIST2H3PS2Q5TEC6 136 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 TMEM53Q6P2H8 277 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 UGT2A3Q6UWM9 527 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 C22orf34Q6ZV56 151 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 HIST2H3AQ71DI3 136 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 BCDIN3DQ7Z5W3 292 aaKnown RBP13.25□□□□□ -0.29
NPHP4-205ENST00000466897 LRRC18Q8N456 261 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 ZNF511Q8NB15 262 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 OR52N5Q8NH56 324 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 ZNF75AQ96N20 296 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 FOXN4Q96NZ1 517 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 Q9H521 79 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 EMC7Q9NPA0 242 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 CCNB1IP1Q9NPC3 277 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 NGBQ9NPG2 151 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 ATPIF1Q9UII2 106 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 LHFPL6Q9Y693 200 aa13.25□□□□□ -0.29
NPHP4-205ENST00000466897 TMCC2O75069 709 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 HLA-HP01893 362 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 CRYGSP22914 178 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 KIR2DL3P43628 341 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 MTNR1AP48039 350 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 MEP1BQ16820 701 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 SLC18B1Q6NT16 456 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 LYPD4Q6UWN0 246 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 RHOUQ7L0Q8 258 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 SHFQ7M4L6 423 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 SLC16A9Q7RTY1 509 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 GJC3Q8NFK1 279 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 HTRA1Q92743 480 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 ZMYND19Q96E35 227 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-205ENST00000466897 CNN2Q99439 309 aaKnown RBP13.24□□□□□ -0.29
NPHP4-205ENST00000466897 MNTQ99583 582 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 YIPF3Q9GZM5 350 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 C1orf198Q9H425 327 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 WDR76Q9H967 626 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 MRPS18AQ9NVS2 196 aaKnown RBP13.24□□□□□ -0.29
NPHP4-205ENST00000466897 ASH2LQ9UBL3 628 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 KCNN3Q9UGI6 736 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 POLR1DQ9Y2S0 133 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 RPL36Q9Y3U8 105 aaKnown RBP13.24□□□□□ -0.29
NPHP4-205ENST00000466897 TIMM10BQ9Y5J6 103 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 PRR14LQ5THK1 2151 aa13.24□□□□□ -0.29
NPHP4-205ENST00000466897 TVP23AA6NH52 213 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 ZNF593O00488 134 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-205ENST00000466897 DENRO43583 198 aaKnown RBP13.23□□□□□ -0.29
NPHP4-205ENST00000466897 RAB36O95755 333 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 PTHP01270 115 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 SBK2P0C263 348 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 COX5BP10606 129 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 CD79AP11912 226 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 ZNF14P17017 642 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-205ENST00000466897 ZNF32P17041 273 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 CAPZA2P47755 286 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 CXCR4P61073 352 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 RAB1AP62820 205 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 ZNF91Q05481 1191 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 CDK5R2Q13319 367 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 MEX3BQ6ZN04 569 aaKnown RBP13.23□□□□□ -0.29
NPHP4-205ENST00000466897 MDP1Q86V88 176 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 ERI1Q8IV48 349 aaKnown RBP13.23□□□□□ -0.29
NPHP4-205ENST00000466897 ZNF454Q8N9F8 522 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 FGFBP3Q8TAT2 258 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 LINC01560Q8TB33 94 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 CDADC1Q9BWV3 514 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 OR2H1Q9GZK4 316 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 HEATR1Q9H583 2144 aaKnown RBP13.23□□□□□ -0.29
NPHP4-205ENST00000466897 ADGRL4Q9HBW9 690 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 ICE1Q9Y2F5 2266 aa13.23□□□□□ -0.29
NPHP4-205ENST00000466897 ASH1LQ9NR48 2969 aaKnown RBP13.22□□□□□ -0.29
NPHP4-205ENST00000466897 DOPEY2Q9Y3R5 2298 aa13.22□□□□□ -0.29
NPHP4-205ENST00000466897 A0A1W2PR80 420 aa13.22□□□□□ -0.29
NPHP4-205ENST00000466897 SERPINA5P05154 406 aa13.22□□□□□ -0.29
NPHP4-205ENST00000466897 DBTP11182 482 aaKnown RBP13.22□□□□□ -0.29
NPHP4-205ENST00000466897 CSNK2BP67870 215 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms