RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 AP3S1Q92572 193 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 BADQ92934 168 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 RBPMSQ93062 196 aaKnown RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 MAGOHBQ96A72 148 aaKnown RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 SH3YL1Q96HL8 342 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 NARS2Q96I59 477 aaKnown RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 CYYR1Q96J86 154 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 CNBD2Q96M20 576 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 SPATA13Q96N96 652 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 HBEGFQ99075 208 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 P2RY13Q9BPV8 354 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 GGACTQ9BVM4 153 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 TPPP3Q9BW30 176 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 LRRC2Q9BYS8 371 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 PRRG3Q9BZD7 231 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 PCBD2Q9H0N5 130 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 POLR3FQ9H1D9 316 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 MIXL1Q9H2W2 232 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 VCX2Q9H322 139 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 FBXO44Q9H4M3 255 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 RGCCQ9H4X1 137 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 RPF2Q9H7B2 306 aaKnown RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 NIPAL2Q9H841 368 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 EFCAB1Q9HAE3 211 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 POLD4Q9HCU8 107 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 CCNB1IP1Q9NPC3 277 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 SIRT7Q9NRC8 400 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 FAM212BQ9NTI7 297 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 MCUBQ9NWR8 336 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 PLEK2Q9NYT0 353 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 TMEM216Q9P0N5 145 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 RWDD2AQ9UIY3 292 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 PURGQ9UJV8 347 aaKnown RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 DNPEPQ9ULA0 475 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 SCML1Q9UN30 329 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 MOKQ9UQ07 419 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 OR1A2Q9Y585 309 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 WIF1Q9Y5W5 379 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 NEO1Q92859 1461 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 CEP170BQ9Y4F5 1589 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 ANKRD26Q9UPS8 1709 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 DENND4AQ7Z401 1863 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 A0A087WXM4 84 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 OOEPA6NGQ2 149 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 SAGE2PA6NJ88 616 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 SDR42E2A6NKP2 422 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 PDZK1P1A8MUH7 402 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 SERPINE3A8MV23 424 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 H3BMQ9 156 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 DNASE2O00115 360 aaPredicted RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 LGALS8O00214 317 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 KPNA3O00505 521 aaPredicted RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 CFLARO15519 480 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 PSTPIP1O43586 416 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 KIAA0513O60268 411 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 OR10H3O60404 316 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 DUSP11O75319 330 aaKnown RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 NME6O75414 186 aaPredicted RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 UGT2B17O75795 530 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 TSPAN12O95859 305 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 RLN2P04090 185 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 GYPCP04921 128 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 NUDT17P0C025 328 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 NBEAP1P0C6P0 100 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 RRASP10301 218 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 ATP6V1B2P21281 511 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 MSR1P21757 451 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 PAICSP22234 425 aaKnown RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 ME2P23368 584 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 GLRA1P23415 457 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 ELK4P28324 431 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 GTF2E2P29084 291 aaKnown RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 RFC3P40938 356 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 FRKP42685 505 aaPredicted RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 TGM4P49221 684 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 IDH3GP51553 393 aaPredicted RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 PRKXP51817 358 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 TMBIM6P55061 237 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 RGS8P57771 180 aaPredicted RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 RAP1BP61224 184 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 TNNC1P63316 161 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 SLC7A9P82251 487 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 MRPS22P82650 360 aaKnown RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 VLDLRP98155 873 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 GNA12Q03113 381 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 PDIA2Q13087 525 aaKnown RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 BIKQ13323 160 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 P2RY14Q15391 338 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 SPHARQ15513 63 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 TRAM1Q15629 374 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 MPPED2Q15777 294 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 ACKR1Q16570 336 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 GUK1Q16774 197 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 MEP1BQ16820 701 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 MICBQ29980 383 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 MICAQ29983 383 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF181Q2M3W8 571 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 TEX44Q53QW1 395 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 CLLU1Q5K131 121 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 C9orf64Q5T6V5 341 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms