RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 HINT3Q9NQE9 182 aaKnown RBP12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 MOKQ9UQ07 419 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 TIMM10BQ9Y5J6 103 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 IQCMA0A1B0GVH7 501 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 SHISA9B4DS77 424 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 PTHP01270 115 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 CRYAAP02489 173 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 FMO3P31513 532 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 PSG4Q00888 419 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 AQP6Q13520 282 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 PABPC1L2AQ5JQF8 200 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 ZNF584Q8IVC4 421 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 KBTBD8Q8NFY9 601 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 LILRB1Q8NHL6 650 aaPredicted RBP12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 AKR7LQ8NHP1 331 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 AKAP1Q92667 903 aaKnown RBP eCLIP12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 GRIP2Q9C0E4 1043 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 OR2H1Q9GZK4 316 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 OR51V1Q9H2C8 321 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 TOR3AQ9H497 397 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 MRPL22Q9NWU5 206 aaKnown RBP12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 NKX1-2Q9UD57 310 aaPredicted RBP12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 POLR1DQ9Y2S0 133 aa12.55□□□□□ -0.4
DNMT3A-208ENST00000466601 TVP23AA6NH52 213 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 ATP6V1G2-DDX39BF2Z307 99 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 CASQ2O14958 399 aaPredicted RBP12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 TLX2O43763 284 aaPredicted RBP12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 PRKYO43930 277 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 GLCEO94923 617 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 SNAP29O95721 258 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 ZNF823P16415 610 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 PEX2P28328 305 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 CALCRP30988 508 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 BLVRAP53004 296 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 EFNB1P98172 346 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 SLC34A1Q06495 639 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 SCRN3Q0VDG4 424 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 ZNF672Q499Z4 452 aaPredicted RBP12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 KLHL12Q53G59 568 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 LINC01590Q5TEZ4 76 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 LYPD4Q6UWN0 246 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 CXXC5Q7LFL8 322 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 ALDH16A1Q8IZ83 802 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 GALNT4Q8N4A0 578 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 TCEANCQ8N8B7 351 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 ZNF511Q8NB15 262 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 CPEB3Q8NE35 698 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 OR6K6Q8NGW6 343 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 NEUROG1Q92886 237 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 MBOAT4Q96T53 435 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 CDADC1Q9BWV3 514 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 WNT5BQ9H1J7 359 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 C1orf198Q9H425 327 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 RNPEPL1Q9HAU8 725 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 C8orf4Q9NR00 106 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 ASH2LQ9UBL3 628 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 POU2F3Q9UKI9 436 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 ATP23Q9Y6H3 246 aa12.54□□□□□ -0.4
DNMT3A-208ENST00000466601 CRYBG3Q68DQ2 2970 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 IGHV2OR16-5A0A0B4J2B6 119 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 E9PQ18 207 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 M0R129 80 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 HS3ST1O14792 307 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 SGCEO43556 437 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 APLNRP35414 380 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 CDH11P55287 796 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 ADAM8P78325 824 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 OGFRL1Q5TC84 451 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 ZNF774Q6NX45 483 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 PACRGLQ8N7B6 248 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 SLC30A7Q8NEW0 376 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 BBS1Q8NFJ9 593 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 OR1J2Q8NGS2 313 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 TMEM163Q8TC26 289 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 HRASLS5Q96KN8 279 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 LURAP1Q96LR2 239 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 IL4I1Q96RQ9 567 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 UBTD1Q9HAC8 227 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 KCNG2Q9UJ96 466 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 LHFPL6Q9Y693 200 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 COMMD3-BMI1R4GMX3 469 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 CACNA1DQ01668 2161 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 ABCA4P78363 2273 aa12.53□□□□□ -0.4
DNMT3A-208ENST00000466601 NBPF19A0A087WUL8 3843 aa12.52□□□□□ -0.4
DNMT3A-208ENST00000466601 RER1O15258 196 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 PRODHO43272 600 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 DOK2O60496 412 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 CCL2P13500 99 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 ZNF35P13682 527 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 SLC2A5P22732 501 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 STOMP27105 288 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 APEX1P27695 318 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 GSTT1P30711 240 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 GGT2P36268 569 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 ENTPD1P49961 510 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 CDC42P60953 191 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 RPS7P62081 194 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 HGFACQ04756 655 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 APOFQ13790 326 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 TBC1D28Q2M2D7 210 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms