RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 TAF9Q16594 264 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 ZNF718Q3SXZ3 478 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 SPATA46Q5T0L3 261 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 THEM4Q5T1C6 240 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 C10orf128Q5T292 105 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 ARMC4Q5T2S8 1044 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 INTS11Q5TA45 600 aaKnown RBP8.22□□□□□ -1.09
USP39-212ENST00000465514 OLFML2AQ68BL7 652 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 CCDC80Q76M96 950 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 ZNF771Q7L3S4 317 aaPredicted RBP8.22□□□□□ -1.09
USP39-212ENST00000465514 HDDC2Q7Z4H3 204 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 REC114Q7Z4M0 266 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 NKAIN4Q8IVV8 208 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 ZNF101Q8IZC7 436 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 OR4F5Q8NH21 305 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 MOSPD2Q8NHP6 518 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 TMEM255BQ8WV15 326 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 CCL17Q92583 94 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 SGTBQ96EQ0 304 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 TIMD4Q96H15 378 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 POM121L2Q96KW2 1035 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 RASSF4Q9H2L5 321 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 SAP30LQ9HAJ7 183 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 CCNB1IP1Q9NPC3 277 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 PLEK2Q9NYT0 353 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 EIF3KQ9UBQ5 218 aaKnown RBP8.22□□□□□ -1.09
USP39-212ENST00000465514 KLHL21Q9UJP4 597 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 SH3GLB1Q9Y371 365 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 UGT2A1Q9Y4X1 527 aa8.22□□□□□ -1.09
USP39-212ENST00000465514 LOC100509620A0A075B734 347 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 IGKV1D-43A0A0B4J1Z2 117 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 C5orf49A4QMS7 147 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 LCE2BO14633 110 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 SHOX2O60902 331 aaPredicted RBP8.21□□□□□ -1.1
USP39-212ENST00000465514 IGHV1-46P01743 117 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 VIMP08670 466 aaKnown RBP8.21□□□□□ -1.1
USP39-212ENST00000465514 TNFRSF1BP20333 461 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 RBM34P42696 430 aaKnown RBP8.21□□□□□ -1.1
USP39-212ENST00000465514 GDI2P50395 445 aaKnown RBP8.21□□□□□ -1.1
USP39-212ENST00000465514 MMP15P51511 669 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 TAS2R41P59536 307 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 LCN2P80188 198 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 PSG4Q00888 419 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 FMODQ06828 376 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 VMACQ2NL98 169 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 TMEM255AQ5JRV8 349 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 KLF17Q5JT82 389 aaPredicted RBP8.21□□□□□ -1.1
USP39-212ENST00000465514 FAM209AQ5JX71 171 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 C11orf87Q6NUJ2 197 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 C16orf87Q6PH81 154 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 AKR7LQ8NHP1 331 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 SLC25A40Q8TBP6 338 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 TSPEARQ8WU66 669 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 TMEM239Q8WW34 195 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 DYDC1Q8WWB3 177 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 IPCEF1Q8WWN9 437 aaPredicted RBP8.21□□□□□ -1.1
USP39-212ENST00000465514 RASSF5Q8WWW0 418 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 NSMAFQ92636 917 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 HDAC2Q92769 488 aaKnown RBP8.21□□□□□ -1.1
USP39-212ENST00000465514 NABP1Q96AH0 204 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 NMD3Q96D46 503 aaKnown RBP8.21□□□□□ -1.1
USP39-212ENST00000465514 ELMOD3Q96FG2 381 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 MARS2Q96GW9 593 aaKnown RBP8.21□□□□□ -1.1
USP39-212ENST00000465514 ATP6V1G3Q96LB4 118 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 C20orf141Q9NUB4 165 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 STX18Q9P2W9 335 aaKnown RBP8.21□□□□□ -1.1
USP39-212ENST00000465514 RIMS3Q9UJD0 308 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 RYR2Q92736 4967 aa8.21□□□□□ -1.1
USP39-212ENST00000465514 DOCK11Q5JSL3 2073 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 PLSCR5A0PG75 271 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 ISPDA4D126 451 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 FAM181BA6NEQ2 426 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 ZSCAN5BA6NJL1 495 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 UBOX5O94941 541 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 OR5F1O95221 314 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 IGF2P01344 180 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 TSPAN19P0C672 248 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 SELEP16581 610 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 LOXL3P58215 753 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 ERVK-25P63136 954 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 RELBQ01201 579 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 CD47Q08722 323 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 PIN1Q13526 163 aaPredicted RBP8.2□□□□□ -1.1
USP39-212ENST00000465514 CYLC2Q14093 348 aaPredicted RBP8.2□□□□□ -1.1
USP39-212ENST00000465514 ZNF362Q5T0B9 420 aaPredicted RBP8.2□□□□□ -1.1
USP39-212ENST00000465514 FAM27BQ5VT28 67 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 MBNL2Q5VZF2 373 aaKnown RBP8.2□□□□□ -1.1
USP39-212ENST00000465514 NANOGP8Q6NSW7 305 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 SLC25A47Q6Q0C1 308 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 KLF14Q8TD94 323 aaPredicted RBP8.2□□□□□ -1.1
USP39-212ENST00000465514 LIPHQ8WWY8 451 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 STON2Q8WXE9 905 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 POP5Q969H6 163 aaKnown RBP8.2□□□□□ -1.1
USP39-212ENST00000465514 GAL3ST1Q99999 423 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 OR2J1Q9GZK6 312 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 POLR2J2Q9GZM3 115 aaKnown RBP8.2□□□□□ -1.1
USP39-212ENST00000465514 EGLN1Q9GZT9 426 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 POLR2J3Q9H1A7 115 aaKnown RBP8.2□□□□□ -1.1
USP39-212ENST00000465514 WNT5BQ9H1J7 359 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 TXNIPQ9H3M7 391 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms