RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 DNAH1Q9P2D7 4330 aa12.41□□□□□ -0.42
HDAC6-214ENST00000465269 A0A0G2JND7 137 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 GPR37O15354 613 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 QDPRP09417 244 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 TROVE2P10155 538 aaKnown RBP eCLIP12.4□□□□□ -0.42
HDAC6-214ENST00000465269 FUT4P22083 530 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 CFHR2P36980 270 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 HOXA4Q00056 320 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-214ENST00000465269 PSG7Q13046 419 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 MAD2L1Q13257 205 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-214ENST00000465269 HERPUD1Q15011 391 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 MTX3Q5HYI7 312 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 DHRS7BQ6IAN0 325 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-214ENST00000465269 ZNF621Q6ZSS3 439 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 HIPK4Q8NE63 616 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 C19orf18Q8NEA5 215 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 SLC38A5Q8WUX1 472 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 TEX37Q96LM6 180 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 SAMD8Q96LT4 415 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 CCDC115Q96NT0 180 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 ASPNQ9BXN1 380 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 CYSLTR2Q9NS75 346 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 ACOXLQ9NUZ1 547 aa12.4□□□□□ -0.42
HDAC6-214ENST00000465269 GAR1Q9NY12 217 aaKnown RBP12.4□□□□□ -0.42
HDAC6-214ENST00000465269 NOP53Q9NZM5 478 aaKnown RBP12.4□□□□□ -0.42
HDAC6-214ENST00000465269 E9PBE3 544 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 PTHP01270 115 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 ALDOCP09972 364 aaKnown RBP12.39□□□□□ -0.43
HDAC6-214ENST00000465269 ADORA3P0DMS8 318 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 CDAP32320 146 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 PITPNBP48739 271 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 ERFP50548 548 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 NSUN5P1Q3KNT7 163 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 ALG10BQ5I7T1 473 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 Q6ZTK2 550 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 SLC35D2Q76EJ3 337 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 NET1Q7Z628 596 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-214ENST00000465269 PXKQ7Z7A4 578 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 CPLX4Q7Z7G2 160 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 GATAD2BQ8WXI9 593 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 LHX4Q969G2 390 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 NEIL1Q96FI4 390 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-214ENST00000465269 TMEM19Q96HH6 336 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 OR2V2Q96R30 315 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 ZNF347Q96SE7 839 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 ELAC2Q9BQ52 826 aaKnown RBP12.39□□□□□ -0.43
HDAC6-214ENST00000465269 TMEM120AQ9BXJ8 343 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 MRPL39Q9NYK5 338 aaKnown RBP12.39□□□□□ -0.43
HDAC6-214ENST00000465269 P2RX2Q9UBL9 471 aa12.39□□□□□ -0.43
HDAC6-214ENST00000465269 UBDO15205 165 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 MGRN1O60291 552 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 TSPAN9O75954 239 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 MMP9P14780 707 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 ZNF32P17041 273 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 MVDP53602 400 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 PRB3Q04118 309 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-214ENST00000465269 DEFB121Q5J5C9 76 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 WDR25Q64LD2 544 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-214ENST00000465269 SLC35E4Q6ICL7 350 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 OGFOD2Q6N063 350 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 SCAIQ8N9R8 606 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 OR6X1Q8NH79 312 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 ZNF566Q969W8 418 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 PANX1Q96RD7 426 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 CCDC28BQ9BUN5 200 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 GCM1Q9NP62 436 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 ASIC5Q9NY37 505 aa12.38□□□□□ -0.43
HDAC6-214ENST00000465269 EIF3KQ9UBQ5 218 aaKnown RBP12.38□□□□□ -0.43
HDAC6-214ENST00000465269 IGHV1-69DA0A0B4J2H0 117 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 TOX4O94842 621 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 IGHV1-69P01742 117 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 PGA4P0DJD7 388 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 PGA3P0DJD8 388 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 TNFRSF1AP19438 455 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 S100A3P33764 101 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 LIPAP38571 399 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 GDI2P50395 445 aaKnown RBP12.37□□□□□ -0.43
HDAC6-214ENST00000465269 ERVK-25P63136 954 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 ZBTB37Q5TC79 503 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 GDPGP1Q6ZNW5 385 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 C1orf122Q6ZSJ8 110 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 OR8B3Q8NGG8 313 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 PLEKHA8Q96JA3 519 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 OR8B2Q96RD0 313 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 SIKE1Q9BRV8 207 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 SLC19A3Q9BZV2 496 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 MMP28Q9H239 520 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 AIG1Q9NVV5 245 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 CLN8Q9UBY8 286 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 MIOXQ9UGB7 285 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 BTNL2Q9UIR0 455 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 ZNF232Q9UNY5 417 aa12.37□□□□□ -0.43
HDAC6-214ENST00000465269 WI2-2373I1.2A0A1W2PRP0 233 aa12.36□□□□□ -0.43
HDAC6-214ENST00000465269 PPP1R3DO95685 299 aa12.36□□□□□ -0.43
HDAC6-214ENST00000465269 NUDT7P0C024 238 aa12.36□□□□□ -0.43
HDAC6-214ENST00000465269 TNFSF4P23510 183 aa12.36□□□□□ -0.43
HDAC6-214ENST00000465269 IL12AP29459 219 aa12.36□□□□□ -0.43
HDAC6-214ENST00000465269 CRATP43155 626 aa12.36□□□□□ -0.43
HDAC6-214ENST00000465269 ANXA11P50995 505 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms