RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 SAC3D1A6NKF1 404 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 ANKRD65E5RJM6 399 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 E7EQL1 145 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 CTLA4P16410 223 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 DAPP51397 102 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 RAB1AP62820 205 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 SLC36A2Q495M3 483 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 DPPA2Q7Z7J5 298 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 MDP1Q86V88 176 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 LRRC18Q8N456 261 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 FAM169BQ8N8A8 192 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 SDR9C7Q8NEX9 313 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 OR4Q3Q8NH05 313 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 HTRA1Q92743 480 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 SLC38A2Q96QD8 506 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 RHNO1Q9BSD3 238 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 RNF121Q9H920 327 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 SRA1Q9HD15 236 aaKnown RBP15.37■□□□□ 0.05
COL7A1-205ENST00000465238 KRT84Q9NSB2 600 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 CBLN4Q9NTU7 201 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 B3GNT2Q9NY97 397 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 KLHL21Q9UJP4 597 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 OAZ3Q9UMX2 235 aa15.37■□□□□ 0.05
COL7A1-205ENST00000465238 ZNF503-AS2A6NEH8 195 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 CD5LO43866 347 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 SSX4O60224 188 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 RAB36O95755 333 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 IFNGP01579 166 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 LAP3P28838 519 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 GIPRP48546 466 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 CENPAP49450 140 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 NPRL3Q12980 569 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 GINS1Q14691 196 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 C3orf36Q3SXR2 165 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 FAM27BQ5VT28 67 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 C11orf71Q6IPW1 123 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 SLC27A4Q6P1M0 643 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 TMEM53Q6P2H8 277 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 FBXL14Q8N1E6 418 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 MUC15Q8N387 334 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 KCNS3Q9BQ31 491 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 CACNG6Q9BXT2 260 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 TEX12Q9BXU0 123 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 GABARAPL1Q9H0R8 117 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 CCNB1IP1Q9NPC3 277 aa15.36■□□□□ 0.05
COL7A1-205ENST00000465238 RPRD1BQ9NQG5 326 aaKnown RBP15.36■□□□□ 0.05
COL7A1-205ENST00000465238 CRNNQ9UBG3 495 aaPredicted RBP15.36■□□□□ 0.05
COL7A1-205ENST00000465238 COA3Q9Y2R0 106 aaPredicted RBP15.36■□□□□ 0.05
COL7A1-205ENST00000465238 IGHV1-18A0A0C4DH31 117 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 OR6C68A6NDL8 312 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 RIIAD1A6NNX1 92 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 BAG2O95816 211 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 IGKV3-15P01624 115 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 PATE4P0C8F1 98 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 MSR1P21757 451 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 GRK5P34947 590 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 PTDSS1P48651 473 aaKnown RBP15.35■□□□□ 0.05
COL7A1-205ENST00000465238 IDH3GP51553 393 aaPredicted RBP15.35■□□□□ 0.05
COL7A1-205ENST00000465238 NUDT6P53370 316 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 DSCR9P59020 149 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 SPOCK1Q08629 439 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 ZNF544Q6NX49 715 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 FOXL2NBQ6ZUU3 175 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 GLB1L2Q8IW92 636 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 PARP8Q8N3A8 854 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 IQCF1Q8N6M8 205 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 NPEPL1Q8NDH3 523 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 NABP1Q96AH0 204 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 TSSK2Q96PF2 358 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 OSBPL10Q9BXB5 764 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 ZNF224Q9NZL3 707 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 FBXL3Q9UKT7 428 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 B9D1Q9UPM9 204 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 FBN3Q75N90 2809 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 STAB1Q9NY15 2570 aa15.35■□□□□ 0.05
COL7A1-205ENST00000465238 IGLV1-44P01699 117 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 CRYAAP02489 173 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 HMGN1P05114 100 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 FABP6P51161 128 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 CRISP1P54107 249 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 ESRRGP62508 458 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 KDM4DQ6B0I6 523 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 CLEC2AQ6UVW9 174 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 CXXC5Q7LFL8 322 aaKnown RBP15.34■□□□□ 0.05
COL7A1-205ENST00000465238 OR6V1Q8N148 313 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 CYB561A3Q8NBI2 242 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 SLC37A3Q8NCC5 494 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 FGFBP3Q8TAT2 258 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 FOXN4Q96NZ1 517 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 RBM4BQ9BQ04 359 aaKnown RBP15.34■□□□□ 0.05
COL7A1-205ENST00000465238 RBM4Q9BWF3 364 aaKnown RBP15.34■□□□□ 0.05
COL7A1-205ENST00000465238 FN3KQ9H479 309 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 NOX3Q9HBY0 568 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 POLE4Q9NR33 117 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 YAE1D1Q9NRH1 226 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 ENOPH1Q9UHY7 261 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 FKBP7Q9Y680 259 aa15.34■□□□□ 0.05
COL7A1-205ENST00000465238 IGHV4-30-2A0A087WSY4 118 aa15.33■□□□□ 0.04
COL7A1-205ENST00000465238 C12orf71A8MTZ7 269 aa15.33■□□□□ 0.04
COL7A1-205ENST00000465238 H7C417 338 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms