RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 GPR35Q9HC97 309 aa13.61□□□□□ -0.23
GYPC-205ENST00000464053 ST6GALNAC2Q9UJ37 374 aa13.61□□□□□ -0.23
GYPC-205ENST00000464053 NCOA6Q14686 2063 aaPredicted RBP13.61□□□□□ -0.23
GYPC-205ENST00000464053 LOC100506127A0A0U1RQW1 187 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 AHRRA9YTQ3 701 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 PHYHO14832 338 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 NOL3O60936 208 aaKnown RBP13.6□□□□□ -0.23
GYPC-205ENST00000464053 RPP14O95059 124 aaKnown RBP13.6□□□□□ -0.23
GYPC-205ENST00000464053 CRYBB2P43320 205 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 EGR3Q06889 387 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 CEACAM16Q2WEN9 425 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 KRTCAP3Q53RY4 240 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 YIPF7Q8N8F6 280 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 ZNF454Q8N9F8 522 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 C9orf106Q8NAJ2 232 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 HSD17B8Q92506 261 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 SNRNP40Q96DI7 357 aaKnown RBP13.6□□□□□ -0.23
GYPC-205ENST00000464053 DOCK7Q96N67 2140 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 TM9SF2Q99805 663 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 TTYH2Q9BSA4 534 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 CENPOQ9BU64 300 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 ZNF416Q9BWM5 594 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 C12orf49Q9H741 205 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 SULT1C4O75897 302 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 KRT8P05787 483 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 ZNF84P51523 738 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 GBX2P52951 348 aaPredicted RBP13.6□□□□□ -0.23
GYPC-205ENST00000464053 FOXG1P55316 489 aaPredicted RBP13.6□□□□□ -0.23
GYPC-205ENST00000464053 NANOS3P60323 173 aaKnown RBP13.6□□□□□ -0.23
GYPC-205ENST00000464053 SIRPAP78324 504 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 ROR2Q01974 943 aaKnown RBP13.6□□□□□ -0.23
GYPC-205ENST00000464053 ROM1Q03395 351 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 RIPPLY2Q5TAB7 128 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 LIPNQ5VXI9 398 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 ARL9Q6T311 187 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 CFAP77Q6ZQR2 320 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 GCNT2Q8N0V5 402 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 LRRC18Q8N456 261 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 TEX19Q8NA77 164 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 OR10S1Q8NGN2 331 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 OR52N5Q8NH56 324 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 CPT1CQ8TCG5 803 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 ASB17Q8WXJ9 295 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 APH1AQ96BI3 265 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 MRPL48Q96GC5 212 aaKnown RBP13.6□□□□□ -0.23
GYPC-205ENST00000464053 GMPPAQ96IJ6 420 aaPredicted RBP13.6□□□□□ -0.23
GYPC-205ENST00000464053 DCLRE1CQ96SD1 692 aaKnown RBP13.6□□□□□ -0.23
GYPC-205ENST00000464053 LINC00470Q9BZP3 86 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 NELFAQ9H3P2 528 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 ELOVL3Q9HB03 270 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 B3GAT2Q9NPZ5 323 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 ASH2LQ9UBL3 628 aa13.6□□□□□ -0.23
GYPC-205ENST00000464053 A0A1W2PPW3 197 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 TMEM8BA6NDV4 472 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 TRIM64BA6NI03 449 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 OGG1O15527 345 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 TMCC2O75069 709 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 SS18L1O75177 396 aaPredicted RBP13.59□□□□□ -0.23
GYPC-205ENST00000464053 TPOP07202 933 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 MSR1P21757 451 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 PSMA1P25786 263 aaKnown RBP13.59□□□□□ -0.23
GYPC-205ENST00000464053 MRPS34P82930 218 aaKnown RBP13.59□□□□□ -0.23
GYPC-205ENST00000464053 SLC3A1Q07837 685 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 ENDOGQ14249 297 aaKnown RBP13.59□□□□□ -0.23
GYPC-205ENST00000464053 INSL4Q14641 139 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 DMKNQ6E0U4 476 aaPredicted RBP13.59□□□□□ -0.23
GYPC-205ENST00000464053 RTL6Q6ICC9 239 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 KCTD20Q7Z5Y7 419 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 KRT77Q7Z794 578 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 ZNF679Q8IYX0 411 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 NDNFQ8TB73 568 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 WNT2BQ93097 391 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 TMED9Q9BVK6 235 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 GP6Q9HCN6 339 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 TMEM38BQ9NVV0 291 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 PRSS50Q9UI38 385 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 GDF2Q9UK05 429 aaPredicted RBP13.59□□□□□ -0.23
GYPC-205ENST00000464053 STUB1Q9UNE7 303 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 POLR1DQ9Y2S0 133 aa13.59□□□□□ -0.23
GYPC-205ENST00000464053 PLPP2O43688 288 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 KRT33AO76009 404 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 TACSTD2P09758 323 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 B4GALT1P15291 398 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 GABRA5P31644 462 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 GUCA1AP43080 201 aaPredicted RBP13.58□□□□□ -0.24
GYPC-205ENST00000464053 CAPZA2P47755 286 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 FABP5Q01469 135 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 CDK5R1Q15078 307 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 GUSBP1Q15486 140 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 OR7E24Q6IFN5 339 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 SEM1Q6ZVN7 128 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 FAM220AQ7Z4H9 259 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 ZNF100Q8IYN0 542 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 PGLYRP3Q96LB9 341 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 MYCBPQ99417 103 aaPredicted RBP13.58□□□□□ -0.24
GYPC-205ENST00000464053 SLX1AQ9BQ83 275 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 DCUN1D5Q9BTE7 237 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 MROQ9BYG7 248 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 ASF1BQ9NVP2 202 aa13.58□□□□□ -0.24
GYPC-205ENST00000464053 LRP12Q9Y561 859 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms