RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 ASAH2BP0C7U1 165 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 RPS2P15880 293 aaKnown RBP12.13□□□□□ -0.47
SMC1A-204ENST00000463684 SELEP16581 610 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 GSTM3P21266 225 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 PPIBP23284 216 aaKnown RBP12.13□□□□□ -0.47
SMC1A-204ENST00000463684 AQP1P29972 269 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 GUCA1AP43080 201 aaPredicted RBP12.13□□□□□ -0.47
SMC1A-204ENST00000463684 DAP3P51398 398 aaKnown RBP12.13□□□□□ -0.47
SMC1A-204ENST00000463684 ERVK-25P63136 954 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 PAX2Q02962 417 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 PSG7Q13046 419 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 ENTPD8Q5MY95 495 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 C10orf128Q5T292 105 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 BRD3OSQ6XYD6 125 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 POU5F2Q8N7G0 328 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 OR9I1Q8NGQ6 314 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 C4orf45Q96LM5 186 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 SEPHS2Q99611 448 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 MARCH7Q9H992 704 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 STX18Q9P2W9 335 aaKnown RBP12.13□□□□□ -0.47
SMC1A-204ENST00000463684 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.13□□□□□ -0.47
SMC1A-204ENST00000463684 MIOXQ9UGB7 285 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 RNF114Q9Y508 228 aa12.13□□□□□ -0.47
SMC1A-204ENST00000463684 SLC22A31A6NKX4 558 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 CPSF4LA6NMK7 179 aaKnown RBP12.12□□□□□ -0.47
SMC1A-204ENST00000463684 TMEM178BH3BS89 294 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 IFNL4K9M1U5 179 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 M0R3H8 397 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 ERLIN1O75477 346 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 SLC2A10O95528 541 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 ZNF133P52736 654 aaPredicted RBP12.12□□□□□ -0.47
SMC1A-204ENST00000463684 RELBQ01201 579 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 KRT71Q3SY84 523 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 TTMPQ5BVD1 217 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 GPR157Q5UAW9 335 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 Q6YL49 198 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 TMEM86BQ8N661 226 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 SMYD1Q8NB12 490 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 ITLN1Q8WWA0 313 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 ASB10Q8WXI3 467 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 NSMAFQ92636 917 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 FAM71F1Q96KD3 344 aaPredicted RBP12.12□□□□□ -0.47
SMC1A-204ENST00000463684 MAGEB18Q96M61 343 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 SIGLEC11Q96RL6 698 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 TMEM109Q9BVC6 243 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 CHIAQ9BZP6 476 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 OR2H1Q9GZK4 316 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 TMEM38AQ9H6F2 299 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 SMURF2Q9HAU4 748 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 THAP1Q9NVV9 213 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 SLC25A37Q9NYZ2 338 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 SLC7A7Q9UM01 511 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 TIMM10BQ9Y5J6 103 aa12.12□□□□□ -0.47
SMC1A-204ENST00000463684 KIR2DS1A0A191URI9 304 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 GMNCA6NCL1 334 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 ICMTO60725 284 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 NR2C1P13056 603 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 HOXB9P17482 250 aaPredicted RBP12.11□□□□□ -0.47
SMC1A-204ENST00000463684 TUBG1P23258 451 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 UGT2B15P54855 530 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 RPL15P61313 204 aaKnown RBP12.11□□□□□ -0.47
SMC1A-204ENST00000463684 PCBD1P61457 104 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 RPL18Q07020 188 aaKnown RBP12.11□□□□□ -0.47
SMC1A-204ENST00000463684 CD47Q08722 323 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 FAM27BQ5VT28 67 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 ZNF774Q6NX45 483 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 SLC27A4Q6P1M0 643 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 ZNF620Q6ZNG0 422 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 KLBQ86Z14 1044 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 NPEPL1Q8NDH3 523 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 ADAMTS16Q8TE57 1224 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 NABP1Q96AH0 204 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 MPP4Q96JB8 637 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 MAELQ96JY0 434 aaKnown RBP12.11□□□□□ -0.47
SMC1A-204ENST00000463684 OR2V2Q96R30 315 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 WNT5BQ9H1J7 359 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 TCF7L1Q9HCS4 588 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 TUBG2Q9NRH3 451 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 INIPQ9NRY2 104 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 CORO2BQ9UQ03 480 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 ANGPT4Q9Y264 503 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 UGT2A1Q9Y4X1 527 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 POMT1Q9Y6A1 747 aa12.11□□□□□ -0.47
SMC1A-204ENST00000463684 TRAPPC13A5PLN9 417 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 EVPLLA8MZ36 301 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 ABHD16AO95870 558 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 KRTAP10-3P60369 221 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 MPP2Q14168 576 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 LRIF1Q5T3J3 769 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 Q6ZR03 302 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 NLRC3Q7RTR2 1065 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 C10orf111Q8N326 155 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 OR6T1Q8NGN1 323 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 VANGL1Q8TAA9 524 aaPredicted RBP12.1□□□□□ -0.47
SMC1A-204ENST00000463684 FAM110DQ8TAY7 271 aaPredicted RBP12.1□□□□□ -0.47
SMC1A-204ENST00000463684 TBC1D15Q8TC07 691 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 CMBLQ96DG6 245 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 NEIL1Q96FI4 390 aaPredicted RBP12.1□□□□□ -0.47
SMC1A-204ENST00000463684 NUDT16L1Q9BRJ7 211 aaKnown RBP12.1□□□□□ -0.47
SMC1A-204ENST00000463684 TMEM165Q9HC07 324 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms