RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 SLC30A7Q8NEW0 376 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 SLC26A10Q8NG04 563 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 OR6K6Q8NGW6 343 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 OR2AJ1Q8NGZ0 328 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 FGFBP3Q8TAT2 258 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 C11orf40Q8WZ69 217 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 NINJ1Q92982 152 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 DDOQ99489 341 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 NMNAT2Q9BZQ4 307 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 CDH20Q9HBT6 801 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 NOX3Q9HBY0 568 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 C8orf4Q9NR00 106 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 TVP23BQ9NYZ1 205 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 ASH2LQ9UBL3 628 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 CELSR2Q9HCU4 2923 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 CENPEQ02224 2701 aa17.19■□□□□ 0.34
COL9A3-204ENST00000463487 IGHV2OR16-5A0A0B4J2B6 119 aa17.18■□□□□ 0.34
COL9A3-204ENST00000463487 ZAR1LA6NP61 321 aa17.18■□□□□ 0.34
COL9A3-204ENST00000463487 ATP6V1G2-DDX39BF2Z307 99 aa17.18■□□□□ 0.34
COL9A3-204ENST00000463487 SGCEO43556 437 aa17.18■□□□□ 0.34
COL9A3-204ENST00000463487 CELA3BP08861 270 aa17.18■□□□□ 0.34
COL9A3-204ENST00000463487 ANPEPP15144 967 aa17.18■□□□□ 0.34
COL9A3-204ENST00000463487 DNASE1P24855 282 aa17.18■□□□□ 0.34
COL9A3-204ENST00000463487 PYCR1P32322 319 aa17.18■□□□□ 0.34
COL9A3-204ENST00000463487 SLX4IPQ5VYV7 408 aa17.18■□□□□ 0.34
COL9A3-204ENST00000463487 GJC3Q8NFK1 279 aa17.18■□□□□ 0.34
COL9A3-204ENST00000463487 MS4A3Q96HJ5 214 aa17.18■□□□□ 0.34
COL9A3-204ENST00000463487 ZNF75AQ96N20 296 aa17.18■□□□□ 0.34
COL9A3-204ENST00000463487 OR2H1Q9GZK4 316 aa17.18■□□□□ 0.34
COL9A3-204ENST00000463487 DCLRE1BQ9H816 532 aa17.18■□□□□ 0.34
COL9A3-204ENST00000463487 ST6GALNAC2Q9UJ37 374 aa17.18■□□□□ 0.34
COL9A3-204ENST00000463487 NDRG4Q9ULP0 352 aaKnown RBP17.18■□□□□ 0.34
COL9A3-204ENST00000463487 HEATR1Q9H583 2144 aaKnown RBP17.18■□□□□ 0.34
COL9A3-204ENST00000463487 A0A1W2PPR1 153 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 FAM183AA6NL82 134 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 FAM171A2A8MVW0 826 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 PRODHO43272 600 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 MPZL1O95297 269 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 SNAP29O95721 258 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 STOMP27105 288 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 GDI2P50395 445 aaKnown RBP17.17■□□□□ 0.34
COL9A3-204ENST00000463487 RPS23P62266 143 aaKnown RBP17.17■□□□□ 0.34
COL9A3-204ENST00000463487 ADAM8P78325 824 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 PSG4Q00888 419 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 ZNF544Q6NX49 715 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 PLBD1Q6P4A8 553 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 ARL9Q6T311 187 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 UGT2A3Q6UWM9 527 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 FBXL14Q8N1E6 418 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 PIGTQ969N2 578 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 CCL19Q99731 98 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 DHRS9Q9BPW9 319 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 PLEK2Q9NYT0 353 aa17.17■□□□□ 0.34
COL9A3-204ENST00000463487 DOK2O60496 412 aa17.16■□□□□ 0.34
COL9A3-204ENST00000463487 GLCEO94923 617 aa17.16■□□□□ 0.34
COL9A3-204ENST00000463487 GYPBP06028 91 aa17.16■□□□□ 0.34
COL9A3-204ENST00000463487 COX5BP10606 129 aa17.16■□□□□ 0.34
COL9A3-204ENST00000463487 CDC42P60953 191 aa17.16■□□□□ 0.34
COL9A3-204ENST00000463487 ELF3P78545 371 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-204ENST00000463487 TRIP10Q15642 601 aa17.16■□□□□ 0.34
COL9A3-204ENST00000463487 SLC35D3Q5M8T2 416 aa17.16■□□□□ 0.34
COL9A3-204ENST00000463487 ZNF771Q7L3S4 317 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-204ENST00000463487 CXXC5Q7LFL8 322 aaKnown RBP17.16■□□□□ 0.34
COL9A3-204ENST00000463487 MYPOPQ86VE0 399 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-204ENST00000463487 ZNF584Q8IVC4 421 aa17.16■□□□□ 0.34
COL9A3-204ENST00000463487 CPOQ8IVL8 374 aa17.16■□□□□ 0.34
COL9A3-204ENST00000463487 NUP37Q8NFH4 326 aa17.16■□□□□ 0.34
COL9A3-204ENST00000463487 SMAP2Q8WU79 429 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-204ENST00000463487 HDHD2Q9H0R4 259 aa17.16■□□□□ 0.34
COL9A3-204ENST00000463487 OR51V1Q9H2C8 321 aa17.16■□□□□ 0.34
COL9A3-204ENST00000463487 H2AFY2Q9P0M6 372 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-204ENST00000463487 EIF3KQ9UBQ5 218 aaKnown RBP17.16■□□□□ 0.34
COL9A3-204ENST00000463487 ATPIF1Q9UII2 106 aa17.16■□□□□ 0.34
COL9A3-204ENST00000463487 NBPF19A0A087WUL8 3843 aa17.16■□□□□ 0.34
COL9A3-204ENST00000463487 CADP27708 2225 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 GPANK1O95872 356 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 SCG5P05408 212 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 BMP4P12644 408 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 APEX1P27695 318 aaKnown RBP17.15■□□□□ 0.34
COL9A3-204ENST00000463487 CALCRP30988 508 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 HTR5AP47898 357 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 FABP6P51161 128 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 RPS7P62081 194 aaKnown RBP17.15■□□□□ 0.34
COL9A3-204ENST00000463487 MEP1BQ16820 701 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 KLHL12Q53G59 568 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 LCN1P1Q5VSP4 162 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 AGAP6Q5VW22 663 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 C12orf73Q69YU5 71 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 OR51L1Q8NGJ5 315 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 LILRB1Q8NHL6 650 aaPredicted RBP17.15■□□□□ 0.34
COL9A3-204ENST00000463487 AKR7LQ8NHP1 331 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 TMEM171Q8WVE6 324 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 WNT5BQ9H1J7 359 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 VCXQ9H320 206 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 ZNF442Q9H7R0 627 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 HINT3Q9NQE9 182 aaKnown RBP17.15■□□□□ 0.34
COL9A3-204ENST00000463487 CA10Q9NS85 328 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 IMPAD1Q9NX62 359 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 COMMD3-BMI1R4GMX3 469 aa17.15■□□□□ 0.34
COL9A3-204ENST00000463487 E7EQL1 145 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms