RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 VWC2LB2RUY7 222 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 INAFM1C9JVW0 142 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 TNFRSF11BO00300 401 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 IMPA2O14732 288 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 TLX2O43763 284 aaPredicted RBP13.94□□□□□ -0.18
COL1A1-202ENST00000463440 CD5LO43866 347 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 PPP1R3DO95685 299 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 IGFBP1P08833 259 aaPredicted RBP13.94□□□□□ -0.18
COL1A1-202ENST00000463440 CTLA4P16410 223 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 ALDH3B1P43353 468 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 NR4A2P43354 598 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 MAGEA2P43356 314 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 GSSP48637 474 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 HMGA2P52926 109 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 KLF3P57682 345 aaPredicted RBP13.94□□□□□ -0.18
COL1A1-202ENST00000463440 TSPAN31Q12999 210 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 NKPD1Q17RQ9 610 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 KRTAP21-3Q3LHN1 58 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 FAM98BQ52LJ0 330 aaKnown RBP13.94□□□□□ -0.18
COL1A1-202ENST00000463440 DNM1P34Q6PK57 102 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 TRPM8Q7Z2W7 1104 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 GLB1L2Q8IW92 636 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 ICA1LQ8NDH6 482 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 SYNPRQ8TBG9 265 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 ASB9Q96DX5 294 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 FOXN4Q96NZ1 517 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 IFT27Q9BW83 186 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 TPK1Q9H3S4 243 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 EMC7Q9NPA0 242 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 TAS2R1Q9NYW7 299 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 MYEF2Q9P2K5 600 aaKnown RBP13.94□□□□□ -0.18
COL1A1-202ENST00000463440 LYVE1Q9Y5Y7 322 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 FN1P02751 2386 aaKnown RBP13.94□□□□□ -0.18
COL1A1-202ENST00000463440 RTTNQ86VV8 2226 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 LOC100509620A0A075B734 347 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 ARPC3O15145 178 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 SCG5P05408 212 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 ZNF250P15622 560 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 CDKN2AP42771 156 aaKnown RBP13.93□□□□□ -0.18
COL1A1-202ENST00000463440 ERVS71-1P61550 626 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 MS4A2Q01362 244 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 SCRN3Q0VDG4 424 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 GGTLC2Q14390 218 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 MAD2L1BPQ15013 274 aaPredicted RBP13.93□□□□□ -0.18
COL1A1-202ENST00000463440 MOGQ16653 247 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 TMEM249Q2WGJ8 235 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 ZNF774Q6NX45 483 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 PGBD2Q6P3X8 592 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 ARL9Q6T311 187 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 PTCHD4Q6ZW05 846 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 JAZF1Q86VZ6 243 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 C1orf174Q8IYL3 243 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 ZNF786Q8N393 782 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 OR1J1Q8NGS3 322 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 UBASH3BQ8TF42 649 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 CCDC124Q96CT7 223 aaKnown RBP13.93□□□□□ -0.18
COL1A1-202ENST00000463440 THTPAQ9BU02 230 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 TRIM15Q9C019 465 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 SLCO1C1Q9NYB5 712 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 TAAR3PQ9P1P4 343 aa13.93□□□□□ -0.18
COL1A1-202ENST00000463440 NDRG4Q9ULP0 352 aaKnown RBP13.93□□□□□ -0.18
COL1A1-202ENST00000463440 COA3Q9Y2R0 106 aaPredicted RBP13.93□□□□□ -0.18
COL1A1-202ENST00000463440 IGLV3-9A0A075B6K5 115 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 IDH3BO43837 385 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 CCNB2O95067 398 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 CLPTM1O96005 669 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 RENP00797 406 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 COX5BP10606 129 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 NOS3P29474 1203 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 CRABP1P29762 137 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 LSM6P62312 80 aaKnown RBP13.92□□□□□ -0.18
COL1A1-202ENST00000463440 AQP6Q13520 282 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 ZNF718Q3SXZ3 478 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 RPL13AP3Q6NVV1 102 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 UGT2A3Q6UWM9 527 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 ZNF620Q6ZNG0 422 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 SNX33Q8WV41 574 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 SAMD8Q96LT4 415 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 SNX18Q96RF0 628 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 NUAK2Q9H093 628 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 ELOVL3Q9HB03 270 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 YAE1D1Q9NRH1 226 aa13.92□□□□□ -0.18
COL1A1-202ENST00000463440 NAV3Q8IVL0 2385 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 SGCEO43556 437 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 DOK2O60496 412 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 MT-ND5P03915 603 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 NAT2P11245 290 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 GIFP27352 417 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 GCH1P30793 250 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 WNT5AP41221 380 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 CENPAP49450 140 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 ARHGDIAP52565 204 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 TRAP1Q12931 704 aaKnown RBP13.91□□□□□ -0.18
COL1A1-202ENST00000463440 ALKBH6Q3KRA9 238 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 DNAL1Q4LDG9 190 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 OR2T5Q6IEZ7 315 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 LEG1Q6P5S2 330 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 TMEM154Q6P9G4 183 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 PGM2L1Q6PCE3 622 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 ZNF101Q8IZC7 436 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms