RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 TRIP6Q15654 476 aaKnown RBP11.4□□□□□ -0.58
VAPB-203ENST00000463370 ZNF239Q16600 458 aaKnown RBP11.4□□□□□ -0.58
VAPB-203ENST00000463370 CATSPERDQ86XM0 798 aa11.4□□□□□ -0.58
VAPB-203ENST00000463370 OR10S1Q8NGN2 331 aa11.4□□□□□ -0.58
VAPB-203ENST00000463370 ZNF671Q8TAW3 534 aa11.4□□□□□ -0.58
VAPB-203ENST00000463370 GPR148Q8TDV2 347 aa11.4□□□□□ -0.58
VAPB-203ENST00000463370 ZNF385AQ96PM9 386 aaKnown RBP11.4□□□□□ -0.58
VAPB-203ENST00000463370 RBP7Q96R05 134 aa11.4□□□□□ -0.58
VAPB-203ENST00000463370 WACQ9BTA9 647 aa11.4□□□□□ -0.58
VAPB-203ENST00000463370 SRXN1Q9BYN0 137 aa11.4□□□□□ -0.58
VAPB-203ENST00000463370 TCF7L1Q9HCS4 588 aa11.4□□□□□ -0.58
VAPB-203ENST00000463370 ABRACLQ9P1F3 81 aa11.4□□□□□ -0.58
VAPB-203ENST00000463370 PCDHGA9Q9Y5G4 932 aaKnown RBP11.4□□□□□ -0.58
VAPB-203ENST00000463370 KMT2EQ8IZD2 1858 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.39□□□□□ -0.59
VAPB-203ENST00000463370 PTBP1P26599 531 aaKnown RBP eCLIP11.39□□□□□ -0.59
VAPB-203ENST00000463370 RBMS1P29558 406 aaKnown RBP11.39□□□□□ -0.59
VAPB-203ENST00000463370 TALDO1P37837 337 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 KIR2DL3P43628 341 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 CLDN17P56750 224 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 OC90Q02509 493 aaPredicted RBP11.39□□□□□ -0.59
VAPB-203ENST00000463370 THEM4Q5T1C6 240 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 LRFN4Q6PJG9 635 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 OR6X1Q8NH79 312 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 HAVCR2Q8TDQ0 301 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 HPS1Q92902 700 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 MCHR2Q969V1 340 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 SEC61A2Q9H9S3 476 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 LIN7BQ9HAP6 207 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 CENPMQ9NSP4 180 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 STMN3Q9NZ72 180 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 CYB5R1Q9UHQ9 305 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 SPATA2Q9UM82 520 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 V9GY05 133 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 KNTC1P50748 2209 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 HSPB2A8KAH6 182 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 AQP8O94778 261 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 HRGP04196 525 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 LAP3P28838 519 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 CYB561P49447 251 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 CCR9P51686 369 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 PLA2G7Q13093 441 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 EIF3IQ13347 325 aaKnown RBP11.39□□□□□ -0.59
VAPB-203ENST00000463370 HSPB2Q16082 182 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 RNASE12Q5GAN4 147 aaKnown RBP11.39□□□□□ -0.59
VAPB-203ENST00000463370 MTFR2Q6P444 385 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 CFAP77Q6ZQR2 320 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 C19orf18Q8NEA5 215 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 ADAMTS17Q8TE56 1095 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 TSEN15Q8WW01 171 aaKnown RBP11.39□□□□□ -0.59
VAPB-203ENST00000463370 TRIM63Q969Q1 353 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 SLC25A38Q96DW6 304 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 HES7Q9BYE0 225 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 SLC22A4Q9H015 551 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 G6PC2Q9NQR9 355 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 KLHL9Q9P2J3 617 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 MRPS7Q9Y2R9 242 aaKnown RBP11.39□□□□□ -0.59
VAPB-203ENST00000463370 PCDHGA1Q9Y5H4 931 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 LHFPL6Q9Y693 200 aa11.39□□□□□ -0.59
VAPB-203ENST00000463370 CNTRLQ7Z7A1 2325 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 EEF1E1O43324 174 aaKnown RBP11.38□□□□□ -0.59
VAPB-203ENST00000463370 QDPRP09417 244 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 ANOS1P23352 680 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 MAPK3P27361 379 aaPredicted RBP11.38□□□□□ -0.59
VAPB-203ENST00000463370 RFC3P40938 356 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 STARP49675 285 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 HIST3H3Q16695 136 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 PHYHD1Q5SRE7 291 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 SLC25A47Q6Q0C1 308 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 FCRLAQ7L513 359 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 SERPINA12Q8IW75 414 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 CMTM4Q8IZR5 234 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 RNF133Q8WVZ7 376 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 ZNF775Q96BV0 537 aaPredicted RBP11.38□□□□□ -0.59
VAPB-203ENST00000463370 SIGLEC12Q96PQ1 595 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 GPR87Q9BY21 358 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 R4GMQ9 66 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 LOC102725191A0A1B0GVB3 256 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 C21orf140B9A014 251 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 PDCD5O14737 125 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 LMX1BO60663 402 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 ZNF17P17021 662 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 FKBP2P26885 142 aaKnown RBP11.38□□□□□ -0.59
VAPB-203ENST00000463370 CD96P40200 585 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 SRP9P49458 86 aaKnown RBP11.38□□□□□ -0.59
VAPB-203ENST00000463370 RAC1P63000 192 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 WIPI1Q5MNZ9 446 aaPredicted RBP11.38□□□□□ -0.59
VAPB-203ENST00000463370 ATP1A1-AS1Q5TC04 95 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 ASB18Q6ZVZ8 466 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 PRSS45Q7RTY3 260 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 PIP4P1Q86T03 277 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 TMPRSS12Q86WS5 348 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 DEFB124Q8NES8 71 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 OR14L1PQ8NHC6 308 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 ASB5Q8WWX0 329 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 GCDHQ92947 438 aaPredicted RBP11.38□□□□□ -0.59
VAPB-203ENST00000463370 SLAMF6Q96DU3 332 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 ZFP3Q96NJ6 502 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 PIGQQ9BRB3 760 aa11.38□□□□□ -0.59
VAPB-203ENST00000463370 THAP7Q9BT49 309 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms