RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 FKBP2P26885 142 aaKnown RBP6.51□□□□□ -1.37
UBE4B-204ENST00000462658 RPL4P36578 427 aaKnown RBP6.51□□□□□ -1.37
UBE4B-204ENST00000462658 AQP2P41181 271 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 ZNF81P51508 661 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 NUDT6P53370 316 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 MLLT10P55197 1068 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 GABARAPL2P60520 117 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 RPS4XP62701 263 aaKnown RBP6.51□□□□□ -1.37
UBE4B-204ENST00000462658 MFAP5Q13361 173 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 ALKBH1Q13686 389 aaKnown RBP6.51□□□□□ -1.37
UBE4B-204ENST00000462658 APOFQ13790 326 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 DEFB109BQ30KR1 87 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 SLC25A30Q5SVS4 291 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 FAM69AQ5T7M9 428 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 MEDAGQ5VYS4 303 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 ZNF773Q6PK81 442 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 DPY19L2P2Q6ZN68 376 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 NANOGNBQ7Z5D8 188 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 GTPBP8Q8N3Z3 284 aaPredicted RBP6.51□□□□□ -1.37
UBE4B-204ENST00000462658 TMEM217Q8N7C4 229 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 NANOGP1Q8N7R0 232 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 ZNF540Q8NDQ6 660 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 ZNF248Q8NDW4 579 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 OR5M1Q8NGP8 315 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 OR6S1Q8NH40 331 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 MOSPD2Q8NHP6 518 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 C2CD4CQ8TF44 421 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 GGHQ92820 318 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 SLC25A36Q96CQ1 311 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 DNAJA3Q96EY1 480 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 LRR1Q96L50 414 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 ERMAPQ96PL5 475 aaPredicted RBP6.51□□□□□ -1.37
UBE4B-204ENST00000462658 SIGLEC12Q96PQ1 595 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 FAM173AQ9BQD7 235 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 POTEKPQ9BYX7 375 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 OR11A1Q9GZK7 315 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 NDEL1Q9GZM8 345 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 DUSP21Q9H596 190 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 AMBNQ9NP70 447 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 DEPPQ9NTK1 212 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 DNAJC27Q9NZQ0 273 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 RNF7Q9UBF6 113 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 PSORS1C1Q9UIG5 152 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 DKKL1Q9UK85 242 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 BAIAP2Q9UQB8 552 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 RPH3AQ9Y2J0 694 aaPredicted RBP6.51□□□□□ -1.37
UBE4B-204ENST00000462658 IER3IP1Q9Y5U9 82 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 SPIN1Q9Y657 262 aaPredicted RBP6.51□□□□□ -1.37
UBE4B-204ENST00000462658 IGSF10Q6WRI0 2623 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 EXPH5Q8NEV8 1989 aa6.51□□□□□ -1.37
UBE4B-204ENST00000462658 ATMQ13315 3056 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 DPPA5A6NC42 116 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 PINLYPA6NC86 204 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 TRIM64CA6NLI5 447 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 IDH3BO43837 385 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 SLC2A10O95528 541 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 TFAP2AP05549 437 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 SP1P08047 785 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 TSPAN19P0C672 248 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 GRPRP30550 384 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 SRD5A2P31213 254 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 RPL5P46777 297 aaKnown RBP6.5□□□□□ -1.37
UBE4B-204ENST00000462658 CLK1P49759 484 aaKnown RBP6.5□□□□□ -1.37
UBE4B-204ENST00000462658 NR1H2P55055 460 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 ERVK-25P63136 954 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 SLC35A2P78381 396 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 SELENBP1Q13228 472 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 TOMM20Q15388 145 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 RBMS2Q15434 407 aaKnown RBP6.5□□□□□ -1.37
UBE4B-204ENST00000462658 GLYR1Q49A26 553 aaPredicted RBP6.5□□□□□ -1.37
UBE4B-204ENST00000462658 GXYLT1Q4G148 440 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 SYT14P1Q58G82 188 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 ALG10Q5BKT4 473 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 RAET1LQ5VY80 246 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 SLC25A25Q6KCM7 469 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 C3orf33Q6P1S2 294 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 ARHGAP11AQ6P4F7 1023 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 IGFN1Q86VF2 1251 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 LRRC75AQ8NAA5 344 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 MDS2Q8NDY4 140 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 OR2M7Q8NG81 312 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 OR5J2Q8NH18 312 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 MFSD8Q8NHS3 518 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 SGCDQ92629 289 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 HAS2Q92819 552 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 MYDGFQ969H8 173 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 DTNBP1Q96EV8 351 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 ARL5BQ96KC2 179 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 ZNF582Q96NG8 517 aaPredicted RBP6.5□□□□□ -1.37
UBE4B-204ENST00000462658 PIGQQ9BRB3 760 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 TAPBPLQ9BX59 468 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 HES7Q9BYE0 225 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 CCDC90BQ9GZT6 254 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 CCNB1IP1Q9NPC3 277 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 CMC2Q9NRP2 79 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 PAK1IP1Q9NWT1 392 aaPredicted RBP6.5□□□□□ -1.37
UBE4B-204ENST00000462658 TAS2R5Q9NYW4 299 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 ERVK-18Q9QC07 812 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 KLHL21Q9UJP4 597 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 BOKQ9UMX3 212 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms