RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 PGBD2Q6P3X8 592 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 FOXL2NBQ6ZUU3 175 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 HDDC2Q7Z4H3 204 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 DHFR2Q86XF0 187 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 SKA3Q8IX90 412 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 CCDC36Q8IYA8 594 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 ADGRG5Q8IZF4 528 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 SLC22A24Q8N4F4 322 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 OR9Q2Q8NGE9 314 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 UBASH3BQ8TF42 649 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 RASD2Q96D21 266 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 Q96M85 177 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 SH3GL3Q99963 347 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 BTBD10Q9BSF8 475 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 THTPAQ9BU02 230 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 ALG12Q9BV10 488 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 MRPL37Q9BZE1 423 aaKnown RBP6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 RACGAP1Q9H0H5 632 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 MAGIXQ9H6Y5 334 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 MOV10Q9HCE1 1003 aaKnown RBP6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 NRIP3Q9NQ35 241 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 FBXO9Q9UK97 447 aaPredicted RBP6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 TEX13CA0A0J9YWL9 993 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 SLC22A23A1A5C7 686 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 UNC119BA6NIH7 251 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 NCR1O76036 304 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 UBL3O95164 117 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 NDUFB2O95178 105 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 TXNDC12O95881 172 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 HPXP02790 462 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 SCG5P05408 212 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 ADRA2AP08913 450 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 CD79AP11912 226 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 NR4A1P22736 598 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 FPR3P25089 353 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 ARR3P36575 388 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 CAPZA2P47755 286 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 GIPRP48546 466 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 COMPP49747 757 aaPredicted RBP6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 HMGA2P52926 109 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 SMIM11AP58511 58 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 PIGFQ07326 219 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 CD47Q08722 323 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 TRAP1Q12931 704 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 PPP1R8Q12972 351 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 BNIP1Q12981 228 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 KRR1Q13601 381 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 DAG1Q14118 895 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 RAB39AQ14964 217 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 GSG1Q2KHT4 349 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 FAM205BPQ63HN1 556 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 KRT80Q6KB66 452 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF620Q6ZNG0 422 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 PTCHD4Q6ZW05 846 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 PAQR4Q8N4S7 273 aaPredicted RBP6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 CLDND2Q8NHS1 167 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 FANK1Q8TC84 345 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZFAND2BQ8WV99 257 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 MRPL24Q96A35 216 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 MCUR1Q96AQ8 359 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF570Q96NI8 536 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 CADM1Q9BY67 442 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 SMURF2Q9HAU4 748 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 DYNLRB1Q9NP97 96 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 MYEF2Q9P2K5 600 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 STX18Q9P2W9 335 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 IL20RAQ9UHF4 553 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 SPEF1Q9Y4P9 236 aa6.78□□□□□ -1.32
CDC42BPA-210ENST00000462553 WNK1Q9H4A3 2382 aa6.77□□□□□ -1.32
CDC42BPA-210ENST00000462553 DOCK11Q5JSL3 2073 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 A0A0A6YYJ9 748 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 TCRBV3S1A0A5B6 114 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 PRSS37A4D1T9 235 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 A6NIZ1 184 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 B4DSR2 109 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 M0R233 179 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 SPRY1O43609 319 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 SYNGR3O43761 229 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR10H3O60404 316 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 RP2O75695 350 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 PPP1R3DO95685 299 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 ERCC1P07992 297 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR8G3PP0DMU2 310 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 ZNF35P13682 527 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 CTLA4P16410 223 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 EGR1P18146 543 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 SDHAP31040 664 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 PTDSS1P48651 473 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 ZNF84P51523 738 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 RAP1BP61224 184 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 RAB1AP62820 205 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 RAP1AP62834 184 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 MRPS34P82930 218 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 GUCA2AQ02747 115 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 DBPQ10586 325 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 ENDOGQ14249 297 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 DNAL1Q4LDG9 190 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 C1orf94Q6P1W5 598 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 SMARCD3Q6STE5 483 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 C12orf54Q6X4T0 127 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms